GCF_023704175.1 - 10 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP084530.1 (Paenibacillus sp. YPG26)

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 1	NRPS,transAT-PKS	226,078	300,661
Region 2	terpene-precursor	303,541	325,925
Region 3	lanthipeptide-class-ii	453,983	482,479
Region 4	proteusin	884,917	905,156
Region 5	terpene-precursor	1,704,292	1,725,167
Region 6	NI-siderophore	1,993,010	2,024,674	Low	staphyloferrin B	other:other
Region 7	T3PKS,other	2,097,249	2,156,641
Region 8	opine-like-metallophore	2,185,600	2,207,740	High	bacillopaline	other:other
Region 9	cyclic-lactone-autoinducer	2,638,869	2,659,399
Region 10	terpene	3,549,555	3,570,478

NZ_CP084530.1 - Region 1 - NRPS,transAT-PKS

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Location: 226,078 - 300,661 nt. (total: 74,584 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX) and not alpha_am_amid)
transAT-PKS: (cds(PKS_AT and not (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) and (cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) or cds(tra_KS and PP-binding)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

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Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

TFBS Finder

NRPS/PKS modules

NRPS/PKS domains

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Transferases: acylase

LDO05_RS01320: malonyl CoA-acyl carrier protein transacylase

smcogs: SMCOG1021: malonyl CoA-acyl carrier protein transacylase

Hydrolases: esterase phosphatase

LDO05_RS01310: thioesterase

smcogs: SMCOG1004: thioesterase

LDO05_RS01330: FkbH like protein

smcogs: SMCOG1256: FkbH like protein

Ligases: ligase

LDO05_RS01290: AMP-dependent synthetase and ligase

smcogs: SMCOG1002: AMP-dependent synthetase and ligase

LDO05_RS01300: condensation domain-containing protein

smcogs: SMCOG1127: condensation domain-containing protein

LDO05_RS01315: AMP-dependent synthetase and ligase

smcogs: SMCOG1002: AMP-dependent synthetase and ligase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002135.2	0.97	NRPS	bovienimide A	Xenorhabdus bovienii SS-2004
BGC0001135.5	0.92	NRPS	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001128.4	0.91	NRPS	gamexpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0002286.3	0.91	NRPS	ririwpeptide A, ririwpeptide B, ririwpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001833.4	0.90	NRPS	icosalide A, icosalide B	Burkholderia gladioli
BGC0001261.3	0.89	NRPS	AM-toxin	Alternaria alternata
BGC0001132.4	0.89	NRPS	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001825.4	0.82	NRPS	xenematide	Xenorhabdus nematophila AN6/1
BGC0001758.4	0.82	NRPS	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001240.4	0.78	NRPS	serinocyclin A, serinocyclin B	Metarhizium robertsii

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002135.2	0.78	NRPS	bovienimide A	Xenorhabdus bovienii SS-2004
BGC0001135.5	0.76	NRPS	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001128.4	0.76	NRPS	gamexpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0002286.3	0.76	NRPS	ririwpeptide A, ririwpeptide B, ririwpeptide C	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001833.4	0.75	NRPS	icosalide A, icosalide B	Burkholderia gladioli
BGC0001261.3	0.75	NRPS	AM-toxin	Alternaria alternata
BGC0001132.4	0.75	NRPS	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001166.5	0.73	NRPS	HC-toxin	Alternaria jesenskae
BGC0001825.4	0.73	NRPS	xenematide	Xenorhabdus nematophila AN6/1
BGC0001758.4	0.72	NRPS	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454

Similar known clusters from MIBiG 4.0

Similar subclusters

No significant matches found.

Transcription Factor Binding Sites

Binding sites found:

IolR

Description: Regulator of the inositol catabolism
Species: Caulobacter crescentus CB15
Score: 19.18 out of 23.79

Confidence: medium

CRP

Description: Cyclic AMP receptor protein
Species: Escherichia coli str. K-12 substr. MG1655
Score: 18.39 out of 19.26

Confidence: strong

CcpA

Description: Catabolite control protein A
Species: Streptococcus & Clostridium sp.
Score: 17.95 out of 20.97

Confidence: medium

ZuR variant 1

Description: Zinc-responsive repressor
Species: Streptomyces coelicolor
Score: 20.83 out of 28.19

Confidence: medium

Additional weak hits (20):

MntR

Description: Manganese transport regulator
Species: Escherichia coli str. K-12 substr. MG1655
Score: 24.00 out of 39.62

Confidence: weak

RutR

Description: Regulator of the pyrimidine and purine metabolism
Species: Escherichia coli str. K-12 substr. MG1655
Score: 20.25 out of 26.85

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 19.12 out of 26.06

Confidence: weak

HexR

Description: Glucose-responsive regulator
Species: Shewanella oneidensis MR-1
Score: 21.21 out of 31.73

Confidence: weak

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 20.07 out of 28.14

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 18.99 out of 26.06

Confidence: weak

SypG

Description: Regulator of biofilm formation and host colonization
Species: Vibrio fischeri ES114
Score: 21.98 out of 29.25

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 20.01 out of 26.06

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 18.82 out of 26.06

Confidence: weak

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 20.31 out of 28.14

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 19.42 out of 26.06

Confidence: weak

CodY

Description: Regulator of stationary phase and virulence in Gram-positive bacteria
Species: Bacillus, Lactococcus & Streptococcus sp.
Score: 19.81 out of 27.78

Confidence: weak

LexA variant 3

Description: Repressor of DNA damage response
Species: Escherichia coli str. K-12 substr. MG1655
Score: 22.70 out of 32.93

Confidence: weak

LexA variant 3

Description: Repressor of DNA damage response
Species: Escherichia coli str. K-12 substr. MG1655
Score: 22.29 out of 32.93

Confidence: weak

LexA variant 1

Description: Repressor of DNA damage response
Species: Streptomyces coelicolor
Score: 22.13 out of 29.65

Confidence: weak

SypG

Description: Regulator of biofilm formation and host colonization
Species: Vibrio fischeri ES114
Score: 20.90 out of 29.25

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 19.41 out of 26.06

Confidence: weak

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 20.53 out of 28.14

Confidence: weak

RutR

Description: Regulator of the pyrimidine and purine metabolism
Species: Escherichia coli str. K-12 substr. MG1655
Score: 20.43 out of 26.85

Confidence: weak

ZuR variant 2

Description: Zinc-responsive repressor
Species: Pseudomonas protegens Pf-5
Score: 20.98 out of 33.14

Confidence: weak

Module view

Legend

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS substrates

TFBS Finder

Predicted core structure(s)

For candidate cluster 1, location 226077 - 300661:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Phe) + (Cys) + (fatty_acid - Ser - Ser) + (mal - Ser)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

LDO05_RS01290: Phe

Search NORINE for peptide: strict or relaxed

AMP-binding (267..660): Phe

nrpys: Phe

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic (Phe, Tyr, diOH-Bz, Ph-Gly, bOH-Tyr)
Large clusters prediction:: Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)
Small clusters prediction:: Unpolar aromatic ring (Phe, Trp)
Single AA prediction:: phe (Phe)

Stachelhaus prediction details:

Stachelhaus sequence:: LYFAFDASIWEMTLVTAGSVNAYGPTETTVCATA
Nearest Stachelhaus code(s):: Phe DAWTVAAVCK (82% 8Å match)
Stachelhaus code match:: 100% (strong)

LDO05_RS01300: Cys

Search NORINE for peptide: strict or relaxed

AMP-binding (689..966): Cys

nrpys: Cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Polar, uncharged (aliphatic with -SH) (Cys)
Small clusters prediction:: Polar, uncharged (aliphatic with -SH) (Cys)
Single AA prediction:: Polar, uncharged (aliphatic with -SH) (Cys)

Stachelhaus prediction details:

Stachelhaus sequence:: TWVTFDLSVYDGDSLLSGDAALGGATEACIWSNY
Nearest Stachelhaus code(s):: Cys DLYNLSLIWK (76% 8Å match)
Stachelhaus code match:: 90% (moderate)

LDO05_RS01315: fatty_acid - Ser - Ser

Search NORINE for peptide: strict or relaxed

CAL_domain (173..482): fatty_acid

minowa: fatty_acid

Prediction, score:

fatty_acid: 122.8
NH2: 32.3
shikimic_acid: 0.0
Acetyl-CoA: 0.0
AHBA: 0.0

AMP-binding (1158..1623): Ser

nrpys: Ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Aliphatic chain or phenyl group with -OH (Ser, Thr, Dhpg, Hpg)
Small clusters prediction:: ser (Ser)
Single AA prediction:: ser (Ser)

Stachelhaus prediction details:

Stachelhaus sequence:: RWMTFDVSVWEWHFFASGEINLYGPTEATVDVTV
Nearest Stachelhaus code(s):: Ser DVWHFSLVDK (97% 8Å match)
Stachelhaus code match:: 100% (strong)

AMP-binding (2280..2696): Ser

nrpys: Ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Aliphatic chain or phenyl group with -OH (Ser, Thr, Dhpg, Hpg)
Small clusters prediction:: ser (Ser)
Single AA prediction:: ser (Ser)

Stachelhaus prediction details:

Stachelhaus sequence:: RWMTFDVSVWEWHFFASGEINLYGPTEATVDVTV
Nearest Stachelhaus code(s):: Ser DVWHFSLVDK (97% 8Å match)
Stachelhaus code match:: 100% (strong)

LDO05_RS01320: mal

PKS_AT (6..296): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 70.8%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 107.9
Methoxymalonyl-CoA: 50.5
inactive: 43.3
Methylmalonyl-CoA: 40.1
Propionyl-CoA: 26.7
Ethylmalonyl-CoA: 21.0
CHC-CoA: 15.0
2-Methylbutyryl-CoA: 11.3
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Isobutyryl-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

LDO05_RS01330: Ser

Search NORINE for peptide: strict or relaxed

AMP-binding (2478..2894): Ser

nrpys: Ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Aliphatic chain or phenyl group with -OH (Ser, Thr, Dhpg, Hpg)
Small clusters prediction:: ser (Ser)
Single AA prediction:: ser (Ser)

Stachelhaus prediction details:

Stachelhaus sequence:: RWMTFDVSVWEWHFFASGEINLYGPTEATVDVTV
Nearest Stachelhaus code(s):: Ser DVWHFSLVDK (97% 8Å match)
Stachelhaus code match:: 100% (strong)

Link to PARAS substrate predictor

TFBS definitions

Regulator	Description
CRP	Cyclic AMP receptor protein
CcpA	Catabolite control protein A
IolR	Regulator of the inositol catabolism
ZuR variant 1	Zinc-responsive repressor

NZ_CP084530.1 - Region 2 - terpene-precursor

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Location: 303,541 - 325,925 nt. (total: 22,385 nt) Show pHMM detection rules used

terpene-precursor: (PT_FPPS_like and not PT_HPP)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

TFBS Finder

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: oxidoreductase

LDO05_RS01465: FAD dependent oxidoreductase

smcogs: SMCOG1103: FAD dependent oxidoreductase

Ligases: synthetase

LDO05_RS01480: Polyprenyl synthetase

smcogs: SMCOG1182: Polyprenyl synthetase

Translocases: transporter

LDO05_RS01445: sugar-binding lipoprotein

smcogs: SMCOG1143: sugar-binding lipoprotein

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000528.5	0.39	ribosomal	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0001576.3	0.39	ribosomal	divamide A	Prochloron didemni
BGC0001456.3	0.38	terpene	isorenieratene	Streptomyces argillaceus
BGC0000664.5	0.37	terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000643.3	0.37	terpene	carotenoid	Brevundimonas vesicularis
BGC0000557.5	0.37	ribosomal	streptococcin A-FF22	Streptococcus pyogenes
BGC0000043.5	0.36	PKS	curacin A	Moorea producens 19L
BGC0002442.3	0.36	ribosomal	toyoncin	Bacillus toyonensis
BGC0001789.3	0.35	ribosomal	suicin 90-1330	Streptococcus suis
BGC0000498.5	0.35	ribosomal	bovicin HJ50	Streptococcus equinus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000528.5	0.39	ribosomal	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0001576.3	0.39	ribosomal	divamide A	Prochloron didemni
BGC0001456.3	0.38	terpene	isorenieratene	Streptomyces argillaceus
BGC0000664.5	0.37	terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000643.3	0.37	terpene	carotenoid	Brevundimonas vesicularis
BGC0000557.5	0.37	ribosomal	streptococcin A-FF22	Streptococcus pyogenes
BGC0000043.5	0.36	PKS	curacin A	Moorea producens 19L
BGC0002442.3	0.36	ribosomal	toyoncin	Bacillus toyonensis
BGC0001789.3	0.35	ribosomal	suicin 90-1330	Streptococcus suis
BGC0000498.5	0.35	ribosomal	bovicin HJ50	Streptococcus equinus

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Product name	Chain length	Initial cyclisations	Functional groups
sesquiterpene precursor	FPP	C15	acyclic	PP
diterpene precursor	GGPP	C20	acyclic	PP
sesterterpene precursor	GFPP	C25	acyclic	PP
triterpene precursor	HPP	C30	acyclic	PP

Genes with terpene domains:

LDO05_RS01480: PT_FPPS_like

Domain 1 (535 - 756): Prenyltransferase; Farnesyl diphosphate synthase like

Subtype: unknown

Reactions:: IPP, DMAPP → FPP; IPP, DMAPP → GGPP; IPP, DMAPP → GFPP; IPP, DMAPP → HPP

Transcription Factor Binding Sites

Binding sites found:

ToxT

Description: Regulator of MSHA biosynthesis
Species: Vibrio cholerae O395
Score: 18.57 out of 18.57

Confidence: strong

CodY

Description: Regulator of stationary phase and virulence in Gram-positive bacteria
Species: Bacillus, Lactococcus & Streptococcus sp.
Score: 20.46 out of 27.78

Confidence: medium

Additional weak hits (4):

CelR

Description: Cellobiose uptake repressor
Species: Streptomyces coelicolor
Score: 22.11 out of 30.11

Confidence: weak

HexR

Description: Glucose-responsive regulator
Species: Shewanella oneidensis MR-1
Score: 21.66 out of 31.73

Confidence: weak

MatP

Description: Cell cycle regulator
Species: Escherichia coli str. K-12 substr. MG1655
Score: 23.17 out of 25.75

Confidence: weak

LuxO

Description: Repressor of luminescence
Species: Vibrio campbellii ATCC BAA-1116
Score: 19.80 out of 26.12

Confidence: weak

Terpene

TFBS Finder

Glossary

Acronym	Full name
DMAPP	Dimethylallyl diphosphate
FPP	Farnesyl diphosphate
GFPP	Geranylfarnesyl diphosphate
GGPP	Geranylgeranyl diphosphate
HPP	Hexaprenyl diphosphate
IPP	Isopentenyl diphosphate
PP	Diphosphate

TFBS definitions

Regulator	Description
CodY	Regulator of stationary phase and virulence in Gram-positive bacteria
ToxT	Regulator of MSHA biosynthesis

NZ_CP084530.1 - Region 3 - lanthipeptide-class-ii

Download region GenBank file

Download region SVG

Location: 453,983 - 482,479 nt. (total: 28,497 nt) Show pHMM detection rules used

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Lanthipeptides

TFBS Finder

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Lyases: cyclase

LDO05_RS02080: lanthionine synthetase C family protein

smcogs: SMCOG1070: lanthionine synthetase C family protein

LDO05_RS02095: lanthionine synthetase C family protein

smcogs: SMCOG1070: lanthionine synthetase C family protein

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000517.4	0.56	ribosomal	haloduracin β, haloduracin α	Bacillus halodurans C-125
BGC0001210.5	0.55	ribosomal	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000623.3	0.54	ribosomal	plantaricin W α, plantaricin W β	Lactobacillus plantarum
BGC0000525.5	0.53	ribosomal	lichenicidin VK21 A1, lichenicidin VK21 A2	Bacillus licheniformis
BGC0000516.4	0.53	ribosomal	geobacillin II	Geobacillus thermodenitrificans
BGC0000520.5	0.52	ribosomal	lacticin 3147 A1, lacticin 3147 A2	Lactococcus lactis
BGC0001229.4	0.52	ribosomal	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0000552.3	0.52	ribosomal	SmbA, SmbB	Streptococcus mutans
BGC0000555.3	0.52	ribosomal	staphylococcin C55 α, staphylococcin C55 β	Staphylococcus aureus
BGC0001311.5	0.51	ribosomal	flavecins	Ruminococcus flavefaciens FD-1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000517.4	0.56	ribosomal	haloduracin β, haloduracin α	Bacillus halodurans C-125
BGC0001210.5	0.55	ribosomal	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000623.3	0.54	ribosomal	plantaricin W α, plantaricin W β	Lactobacillus plantarum
BGC0000525.5	0.53	ribosomal	lichenicidin VK21 A1, lichenicidin VK21 A2	Bacillus licheniformis
BGC0000516.4	0.53	ribosomal	geobacillin II	Geobacillus thermodenitrificans
BGC0000520.5	0.52	ribosomal	lacticin 3147 A1, lacticin 3147 A2	Lactococcus lactis
BGC0001229.4	0.52	ribosomal	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0000552.3	0.52	ribosomal	SmbA, SmbB	Streptococcus mutans
BGC0000555.3	0.52	ribosomal	staphylococcin C55 α, staphylococcin C55 β	Staphylococcus aureus
BGC0001311.5	0.51	ribosomal	flavecins	Ruminococcus flavefaciens FD-1

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Lanthipeptide predictions

Lanthipeptide(s) for LDO05_RS02080

LDO05_RS02075

Leader:

MLENRNPFIVFNQEAKMEALSPVLAEELIEVDLSIQGG

Core:

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

Core with dehydrations:

CysDhbDhbNDhbFDhbLDhaNYLGNNGGWCysDhbLDhbKECysQRDhaCysN

antiSMASH-DB 4.0 matches for LDO05_RS02075

100.0%

NZ_CP084530.1and 1 other:

NZ_CP084530.1 Lanthipeptides: LDO05_RS02075_lanthipeptide

Lanthipeptides: LDO05_RS02075_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

93.3%

NZ_LT985747.1and 1 other:

NZ_LT985747.1 Lanthipeptides: C8268_RS00165_lanthipeptide

Lanthipeptides: C8268_RS00165_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTFTLS+YLGN GGWCTLTKECQRSCN

1

CTTNTFTLSDYLGNKGGWCTLTKECQRSCN

30

80.0%

NZ_BJTV01000004.1and 1 other:

NZ_BJTV01000004.1 Lanthipeptides: TNCT1_RS10200_lanthipeptide

Lanthipeptides: TNCT1_RS10200_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ LGN+GGWCTLTKECQ +CN

1

CTTNTFSLSDALGNHGGWCTLTKECQANCN

30

with 99 more sequence matches

Only the first 10 are displayed here.

80.0%

NZ_BNBV01000031.1and 1 other:

NZ_BNBV01000031.1 Lanthipeptides: IE286_RS22995_lanthipeptide

Lanthipeptides: IE286_RS22995_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ LGN+GGWCTLTKECQ +CN

1

CTTNTFSLSDALGNSGGWCTLTKECQPNCN

30

80.0%

NZ_CP047419.1and 3 others:

NZ_CP047419.1 Lanthipeptides: GTU71_RS12805_lanthipeptideNZ_PSTO01000045.1 Lanthipeptides: C5C10_RS15590_lanthipeptideNZ_PSTO01000045.1 Lanthipeptides: C5C10_RS15590_lanthipeptide

Lanthipeptides: GTU71_RS12805_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSC

29

CTTNTFTLSN LGN GGWCTLT ECQ +C

1

CTTNTFTLSNVLGNQGGWCTLTVECQPNC

29

80.0%

NZ_CP107567.1and 3 others:

NZ_CP107567.1 Lanthipeptides: OGH68_RS19760_lanthipeptideNZ_CP107567.1 Lanthipeptides: OGH68_RS19760_lanthipeptideNZ_CP107567.1 Lanthipeptides: OGH68_RS19760_lanthipeptide

Lanthipeptides: OGH68_RS19760_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS++LGN GGWCTLTKECQ +CN

1

CTTNTFSLSDWLGNQGGWCTLTKECQPNCN

30

76.7%

NZ_AKXV01000031.1and 4 others:

NZ_AKXV01000031.1 Lanthipeptides: Y19_RS0109895_lanthipeptideNZ_JABBGE010000004.1 Lanthipeptides: HHL19_RS13545_lanthipeptideNZ_LMEI01000006.1 Lanthipeptides: ASC82_RS06140_lanthipeptideNZ_LMEI01000006.1 Lanthipeptides: ASC82_RS06140_lanthipeptide

Lanthipeptides: Y19_RS0109895_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

C+TNTF+LS++LGN GGWCTLTKECQ +CN

1

CSTNTFSLSDFLGNQGGWCTLTKECQPNCN

30

76.7%

NZ_BMMP01000005.1and 3 others:

NZ_BMMP01000005.1 Lanthipeptides: IEY56_RS28370_lanthipeptideNZ_FMHJ01000003.1 Lanthipeptides: H181DRAFT_RS07545_lanthipeptideNZ_FMHJ01000003.1 Lanthipeptides: H181DRAFT_RS07545_lanthipeptide

Lanthipeptides: IEY56_RS28370_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ LGN GGWCTLT ECQ +CN

1

CTTNTFSLSDVLGNTGGWCTLTVECQPNCN

30

76.7%

NZ_BNCA01000011.1and 1 other:

NZ_BNCA01000011.1 Lanthipeptides: IE314_RS15865_lanthipeptide

Lanthipeptides: IE314_RS15865_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ +GN+GGWCTLTKECQ +CN

1

CTTNTFSLSDAVGNHGGWCTLTKECQPNCN

30

76.7%

NZ_CP016795.1and 5 others:

NZ_CP016795.1 Lanthipeptides: BC342_RS18360_lanthipeptideNZ_CP036534.1 Lanthipeptides: EZV63_RS18960_lanthipeptideNZ_CP036534.1 Lanthipeptides: EZV63_RS18960_lanthipeptideNZ_CP094676.1 Lanthipeptides: L6J92_RS01495_lanthipeptideNZ_CP094676.1 Lanthipeptides: L6J92_RS01495_lanthipeptide

Lanthipeptides: BC342_RS18360_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ LGN+GGWCTLTKECQ +C+

1

CTTNTFSLSDALGNHGGWCTLTKECQPNCS

30

76.7%

NZ_CP043317.1and 1 other:

NZ_CP043317.1 Lanthipeptides: FYC74_RS17680_lanthipeptide

Lanthipeptides: FYC74_RS17680_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ LGN+GGWCTLTKECQ +C+

1

CTTNTFSLSDSLGNHGGWCTLTKECQPNCS

30

76.7%

NZ_MJEJ02000054.1and 3 others:

NZ_MJEJ02000054.1 Lanthipeptides: BH683_RS28205_lanthipeptideNZ_QJSP01000005.1 Lanthipeptides: DFR67_RS09500_lanthipeptideNZ_QJSP01000005.1 Lanthipeptides: DFR67_RS09500_lanthipeptide

Lanthipeptides: BH683_RS28205_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSC

29

CTTNTFTLS++LGN+GGWCTLTKE Q +C

1

CTTNTFTLSDFLGNDGGWCTLTKESQNNC

29

73.3%

NZ_JAASAG010000001.1and 1 other:

NZ_JAASAG010000001.1 Lanthipeptides: HCC61_RS30395_lanthipeptide

Lanthipeptides: HCC61_RS30395_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ L N GGWCTLT ECQ +CN

1

CTTNTFSLSDALTNTGGWCTLTVECQPNCN

30

MIBiG 4.0 matches for LDO05_RS02075

86.7%

BGC0002110.3 (QKV49893.1):

Lanthipeptide: birimositide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LSN LGNNGGWCTLTKECQ +CN

1

CTTNTFSLSNALGNNGGWCTLTKECQPNCN

30

46.7%

BGC0000517.4 (BAB04173.1):

Lanthipeptide: haloduracin β or haloduracin α

6

FTLSNYLGNNGGWCTLTKECQRSCN

30

+ +S LGN G +CTLT EC SCN

4

YNISCRLGNKGAYCTLTVECMPSCN

28

23.1%

BGC0001229.4 (SBI_06990):

Lanthipeptide: SBI-06990 A1 or SBI-06989 A2

19

CTLTKECQRSCN

30

CTL+KECQ +CN

28

CTLSKECQPNCN

39

with 1 more sequence matches

10.0%

BGC0000503.5 (cinA):

Lanthipeptide: cinnamycin

25

CQRSCN

30

C++SC+

1

CRQSCS

6

LDO05_RS02090

Leader:

MTKREIRREVLANNTFICEKEERELQDKVGA

Core:

AIPITTSSWICGVASAAFCPSTACTSKC

Core with dehydrations:

AIPIDhbDhbDhaDhaWICysGVADhaAAFCysPDhaDhbACysDhbDhaKCys

antiSMASH-DB 4.0 matches for LDO05_RS02090

100.0%

NZ_CP084530.1and 1 other:

NZ_CP084530.1 Lanthipeptides: LDO05_RS02090_lanthipeptide

Lanthipeptides: LDO05_RS02090_lanthipeptide

1

AIPITTSSWICGVASAAFCPSTACTSKC

28

AIPITTSSWICGVASAAFCPSTACTSKC

1

AIPITTSSWICGVASAAFCPSTACTSKC

28

64.5%

NZ_LT985747.1and 1 other:

NZ_LT985747.1 Lanthipeptides: C8268_RS00150_lanthipeptide

Lanthipeptides: C8268_RS00150_lanthipeptide

1

AIPITTSSWICGVASAAFCPSTACTSKC

28

A+ ITTSSWICG +AA CPSTACT C

4

ALGITTSSWICGFVTAALCPSTACTGDC

31

53.1%

NZ_CP006058.1and 25 others:

NZ_CP006058.1 Lanthipeptides: BAMY6639_RS19790_lanthipeptideNZ_CP021892.1 Lanthipeptides: S100333_RS03330_lanthipeptideNZ_CP021892.1 Lanthipeptides: S100333_RS03330_lanthipeptideNZ_CP026533.1 Lanthipeptides: C3438_RS12920_lanthipeptideNZ_CP026533.1 Lanthipeptides: C3438_RS12920_lanthipeptideNZ_CP028961.1 Lanthipeptides: DBK22_RS18410_lanthipeptideNZ_CP028961.1 Lanthipeptides: DBK22_RS18410_lanthipeptideNZ_CP032855.1 Lanthipeptides: D9C11_RS14705_lanthipeptideNZ_CP032855.1 Lanthipeptides: D9C11_RS14705_lanthipeptideNZ_CP044132.1 Lanthipeptides: F5K02_RS03575_lanthipeptideNZ_CP044132.1 Lanthipeptides: F5K02_RS03575_lanthipeptideNZ_CP061087.1 Lanthipeptides: IAR44_RS03180_lanthipeptideNZ_CP061087.1 Lanthipeptides: IAR44_RS03180_lanthipeptideNZ_CP063276.1 Lanthipeptides: IM743_RS02810_lanthipeptideNZ_CP063276.1 Lanthipeptides: IM743_RS02810_lanthipeptideNZ_CP065791.1 Lanthipeptides: I8N73_RS03410_lanthipeptideNZ_CP065791.1 Lanthipeptides: I8N73_RS03410_lanthipeptideNZ_CP074348.1 Lanthipeptides: KHA74_RS03215_lanthipeptideNZ_CP074348.1 Lanthipeptides: KHA74_RS03215_lanthipeptideNZ_CP083943.1 Lanthipeptides: LCH16_RS03235_lanthipeptideNZ_CP083943.1 Lanthipeptides: LCH16_RS03235_lanthipeptideNZ_JAAHBR010000013.1 Lanthipeptides: G3T15_RS10980_lanthipeptideNZ_JAAHBR010000013.1 Lanthipeptides: G3T15_RS10980_lanthipeptideNZ_JAQEMJ010000013.1 Lanthipeptides: PGW53_RS15460_lanthipeptideNZ_JAQEMJ010000013.1 Lanthipeptides: PGW53_RS15460_lanthipeptide

Lanthipeptides: BAMY6639_RS19790_lanthipeptide

5

TTSSWICGV-ASAAFCPSTACTSKC

28

T SS CGV +AAFCPST CTS C

8

TPSSLPCGVFVTAAFCPSTKCTSSC

32

with 102 more sequence matches

Only the first 10 are displayed here.

50.0%

NZ_CP013862.1and 1 other:

NZ_CP013862.1 Lanthipeptides: AOX59_RS09365_lanthipeptide

Lanthipeptides: AOX59_RS09365_lanthipeptide

5

TTSSWICGVA-SAAFCPSTACTSKC

28

T SS CG+A SA FCP+T CTS+C

8

TPSSVACGIAVSALFCPTTKCTSQC

32

50.0%

NZ_FOBE01000018.1:

Lanthipeptides: BMW61_RS21935_lanthipeptide

1

AIPITTSSWICGVASAAFCPSTACTSKC

28

+PIT I AS AFCPS C+SKC

5

GVPITVPITI--AASTAFCPSIKCSSKC

30

46.4%

NZ_CP025249.1and 1 other:

NZ_CP025249.1 Lanthipeptides: CWT12_RS00390_lanthipeptide

Lanthipeptides: CWT12_RS00390_lanthipeptide

5

TTSSWICGVA-SAAFCPSTACTSKC

28

T SSW CG+ + CP+ AC+SKC

3

TPSSWPCGIGITTTVCPTAACSSKC

27

46.4%

NZ_CP039292.1and 1 other:

NZ_CP039292.1 Lanthipeptides: E4J16_RS14990_lanthipeptide

Lanthipeptides: E4J16_RS14990_lanthipeptide

5

TTSSWICGVA-SAAFCPSTACTSKC

28

T SSW CG+ + CP+ CTSKC

3

TPSSWPCGIGITTTICPTAVCTSKC

27

46.4%

NZ_PCGR01000003.1and 1 other:

NZ_PCGR01000003.1 Lanthipeptides: CQS04_RS09625_lanthipeptide

Lanthipeptides: CQS04_RS09625_lanthipeptide

1

AIPITTSSWICGVASAAFCPSTACTSKC

28

A P + I G SA CP+TACT C

1

ATPTIVITAITGYISANSCPTTACTRAC

28

44.7%

NC_006322.1and 7 others:

NC_006322.1 Lanthipeptides: BLI_RS20290_lanthipeptideNZ_CP033218.1 Lanthipeptides: D9Y32_RS07810_lanthipeptideNZ_CP033218.1 Lanthipeptides: D9Y32_RS07810_lanthipeptideNZ_LQYL01000021.1 Lanthipeptides: B4090_RS08830_lanthipeptideNZ_LQYL01000021.1 Lanthipeptides: B4090_RS08830_lanthipeptideNZ_NIMP01000036.1 Lanthipeptides: CHCC14566_RS11870_lanthipeptideNZ_NIMP01000036.1 Lanthipeptides: CHCC14566_RS11870_lanthipeptide

Lanthipeptides: BLI_RS20290_lanthipeptide

3

PITTSSWICGVA----SAAFCPSTACTSKC

28

P TTSSW C A SA+ CP+T CTS+C

9

PATTSSWTCITAGVTVSASLCPTTKCTSRC

38

43.8%

NC_021362.1and 29 others:

NC_021362.1 Lanthipeptides: BALI_RS00915_lanthipeptideNZ_AP025342.1 Lanthipeptides: L6430_RS07475_lanthipeptideNZ_AP025342.1 Lanthipeptides: L6430_RS07475_lanthipeptideNZ_CABJBE010000012.1 Lanthipeptides: FY264_RS20090_lanthipeptideNZ_CABJBE010000012.1 Lanthipeptides: FY264_RS20090_lanthipeptideNZ_CP010524.1 Lanthipeptides: SC10_RS00915_lanthipeptideNZ_CP010524.1 Lanthipeptides: SC10_RS00915_lanthipeptideNZ_CP020352.1 Lanthipeptides: BLMD_RS01010_lanthipeptideNZ_CP020352.1 Lanthipeptides: BLMD_RS01010_lanthipeptideNZ_CP023168.1 Lanthipeptides: CK945_RS01010_lanthipeptideNZ_CP023168.1 Lanthipeptides: CK945_RS01010_lanthipeptideNZ_CP118744.1 Lanthipeptides: PWG69_RS01010_lanthipeptideNZ_CP118744.1 Lanthipeptides: PWG69_RS01010_lanthipeptideNZ_JAHHXA010000013.1 Lanthipeptides: KM899_RS20270_lanthipeptideNZ_JAHHXA010000013.1 Lanthipeptides: KM899_RS20270_lanthipeptideNZ_KN125579.1 Lanthipeptides: DJ88_RS03665_lanthipeptideNZ_KN125579.1 Lanthipeptides: DJ88_RS03665_lanthipeptideNZ_NIKL01000035.1 Lanthipeptides: CHCC20347_RS19045_lanthipeptideNZ_NIKL01000035.1 Lanthipeptides: CHCC20347_RS19045_lanthipeptideNZ_NIKT01000033.1 Lanthipeptides: CHCC20333_RS16135_lanthipeptideNZ_NIKT01000033.1 Lanthipeptides: CHCC20333_RS16135_lanthipeptideNZ_NILF01000041.1 Lanthipeptides: CHCC15381_RS11925_lanthipeptideNZ_NILF01000041.1 Lanthipeptides: CHCC15381_RS11925_lanthipeptideNZ_NIMP01000010.1 Lanthipeptides: CHCC14566_RS01510_lanthipeptideNZ_NIMP01000010.1 Lanthipeptides: CHCC14566_RS01510_lanthipeptideNZ_NKBC01000001.1 Lanthipeptides: CE036_RS00070_lanthipeptideNZ_NKBC01000001.1 Lanthipeptides: CE036_RS00070_lanthipeptideNZ_QXII01000007.1 Lanthipeptides: D1791_RS21810_lanthipeptideNZ_QXII01000007.1 Lanthipeptides: D1791_RS21810_lanthipeptide

Lanthipeptides: BALI_RS00915_lanthipeptide

5

TTSSWICG-VASAAFCPSTACTSKC

28

T SS CG + +A +CPS ACTS C

8

TPSSLPCGTLVTAVWCPSNACTSDC

32

43.6%

NZ_CP009280.1and 1 other:

NZ_CP009280.1 Lanthipeptides: P40081_RS37160_lanthipeptide

Lanthipeptides: P40081_RS37160_lanthipeptide

3

PITTSSWICGVA----SAAFCPSTACTSKC

28

P+TTSSW C + SA CP+T CTSKC

10

PLTTSSWPCVIGAVDISANLCPTTKCTSKC

39

41.4%

NZ_CP040938.1and 1 other:

NZ_CP040938.1 Lanthipeptides: B5772_RS02455_lanthipeptide

Lanthipeptides: B5772_RS02455_lanthipeptide

4

ITTSSWICGVASAAFCPSTACTSKC

28

ITTS +AS A CP+ C++KC

1

ITTSIPCAVMASTAICPTLVCSNKC

25

41.4%

NZ_JABBGE010000004.1and 1 other:

NZ_JABBGE010000004.1 Lanthipeptides: HHL19_RS13570_lanthipeptide

Lanthipeptides: HHL19_RS13570_lanthipeptide

7

SSWICGVA-------SAAFCPSTACTSKC

28

++W C V SA+ CP+T CTS+C

1

TTWSCAVVTAVATLVSASACPTTKCTSQC

29

MIBiG 4.0 matches for LDO05_RS02090

32.1%

BGC0002110.3 (QKV49894.1):

Lanthipeptide: birimositide

18

FCPSTACTSKC

28

FCP+T CTSKC

16

FCPTTKCTSKC

26

29.7%

BGC0001229.4 (SBI_06989):

Lanthipeptide: SBI-06990 A1 or SBI-06989 A2

15

SAAFCPSTACTSKC

28

SAAFCP+T CTS+C

24

SAAFCPTTKCTSRC

37

allorf_0460692_0460856

Leader:

MKVQVLILVKMISQASHIIPLYKYVLSKNLLEKKHRPAA

Core:

SRSCMAVLSHILDAI

Core with dehydrations:

DhaRDhaCysMAVLDhaHILDAI

antiSMASH-DB 4.0 matches for allorf_0460692_0460856

100.0%

NZ_CP084530.1and 1 other:

NZ_CP084530.1 Lanthipeptides: allorf_0460692_0460856_lanthipeptide

Lanthipeptides: allorf_0460692_0460856_lanthipeptide

1

SRSCMAVLSHILDAI

15

SRSCMAVLSHILDAI

1

SRSCMAVLSHILDAI

15

allorf_0461347_0461490

Leader:

MLKMKEVLSFLPIDLKEWSKAETWGLLQKSPGS

Core:

IPISESICTPPDIL

Core with dehydrations:

IPIDhaEDhaICysDhbPPDIL

antiSMASH-DB 4.0 matches for allorf_0461347_0461490

100.0%

NZ_CP084530.1and 1 other:

NZ_CP084530.1 Lanthipeptides: allorf_0461347_0461490_lanthipeptide

Lanthipeptides: allorf_0461347_0461490_lanthipeptide

1

IPISESICTPPDIL

14

IPISESICTPPDIL

1

IPISESICTPPDIL

14

18.8%

NC_014479.1and 9 others:

NZ_CP026362.1 Lanthipeptides: BV11031_RS00400_lanthipeptideNZ_CP033052.1 Lanthipeptides: D9779_RS17315_lanthipeptideNZ_CP051464.1 Lanthipeptides: HC660_RS17030_lanthipeptideNZ_JALAKK010000002.1 Lanthipeptides: MOB09_RS02800_lanthipeptideNZ_JALAKO010000014.1 Lanthipeptides: MOB26_RS08535_lanthipeptideNZ_JALAOG010000003.1 Lanthipeptides: MOC96_RS02500_lanthipeptideNZ_JALAPG010000043.1 Lanthipeptides: MOC70_RS16815_lanthipeptideNZ_JALAQI010000009.1 Lanthipeptides: MOD13_RS06065_lanthipeptideNZ_NXEM01000027.1 Lanthipeptides: CPT06_RS15285_lanthipeptide

Lanthipeptides: BSUW23_RS16845_lanthipeptide

4

SESICTPPDI

13

SES+CTP +

3

SESLCTPGCV

12

18.8%

NC_016047.1and 6 others:

NZ_CP025079.1 Lanthipeptides: BVQ_RS17705_lanthipeptideNZ_CP047644.1 Lanthipeptides: GNE05_RS17275_lanthipeptideNZ_CP099859.1 Lanthipeptides: NIZ95_RS16280_lanthipeptideNZ_CP101621.1 Lanthipeptides: NN913_RS16115_lanthipeptideNZ_KZ848487.1 Lanthipeptides: DSL71_RS15965_lanthipeptideNZ_MUXL01000003.1 Lanthipeptides: B0W20_RS12275_lanthipeptide

Lanthipeptides: GYO_RS39160_lanthipeptide

4

SESICTP

10

SES+CTP

3

SESVCTP

9

with 3 more sequence matches

18.8%

NZ_CP021903.1and 20 others:

NZ_CP023409.1 Lanthipeptides: Bateq7PJ16_RS18530_lanthipeptideNZ_CP026036.1 Lanthipeptides: C2H93_RS15000_lanthipeptideNZ_CP028218.1 Lanthipeptides: C7M30_RS14555_lanthipeptideNZ_CP035167.1 Lanthipeptides: EQJ08_RS17140_lanthipeptideNZ_CP035226.1 Lanthipeptides: EQW70_RS18175_lanthipeptideNZ_CP045006.1 Lanthipeptides: F9B13_RS03875_lanthipeptideNZ_CP076083.1 Lanthipeptides: KFF76_RS16710_lanthipeptideNZ_CP079759.1 Lanthipeptides: KXZ66_RS17780_lanthipeptideNZ_CP080508.1 Lanthipeptides: K0V03_RS06525_lanthipeptideNZ_CP089148.1 Lanthipeptides: LRO88_RS19055_lanthipeptideNZ_JALAUA010000003.1 Lanthipeptides: MOD32_RS04985_lanthipeptideNZ_JALAVX010000009.1 Lanthipeptides: MOE40_RS09385_lanthipeptideNZ_JAMYDW010000007.1 Lanthipeptides: NHM07_RS16180_lanthipeptideNZ_JAQOXM010000001.1 Lanthipeptides: PO770_RS03875_lanthipeptideNZ_NJRD01000003.1 Lanthipeptides: CE053_RS07200_lanthipeptideNZ_NJRE01000008.1 Lanthipeptides: CE047_RS18435_lanthipeptideNZ_SORJ01000001.1 Lanthipeptides: BJ795_RS01490_lanthipeptideNZ_VFNF01000001.1 Lanthipeptides: FB592_RS01525_lanthipeptideNZ_VIOH01000001.1 Lanthipeptides: FLN47_RS03850_lanthipeptideNZ_VLJL01000012.1 Lanthipeptides: L604_RS09425_lanthipeptide

Lanthipeptides: CD007_RS17065_lanthipeptide

4

SESICTP

10

SES+CTP

3

SESLCTP

9

18.8%

NZ_JAMDIB010000004.1:

Lanthipeptides: M5P35_RS04030_lanthipeptide

4

SESICTPPD

12

S+S+CTPP

3

SKSLCTPPG

11

13.7%

NZ_JADMPO010000001.1:

Lanthipeptides: allorf_303731_303931_lanthipeptide

1

IPISESICTPP

11

IPIS C+PP

8

IPISNLFCSPP

18

allorf_0463481_0463591

Leader:

MRLKSPFCIIIFYFFIIINYTLHGS

Core:

SCKYWIASLLP

Core with dehydrations:

DhaCysKYWIADhaLLP

antiSMASH-DB 4.0 matches for allorf_0463481_0463591

100.0%

NZ_CP084530.1and 1 other:

NZ_CP084530.1 Lanthipeptides: allorf_0463481_0463591_lanthipeptide

Lanthipeptides: allorf_0463481_0463591_lanthipeptide

1

SCKYWIASLLP

11

SCKYWIASLLP

1

SCKYWIASLLP

11

14.3%

NZ_ML219773.1:

Lanthipeptides: allorf_1335288_1335458_lanthipeptide

3

KYWIASLLP

11

+YW+ L+P

13

RYWVDRLVP

21

12.1%

NZ_MKZS01000001.1:

Lanthipeptides: allorf_3081872_3082018_lanthipeptide

4

YWIASLLP

11

+WI+ +LP

20

FWISDMLP

27

Lanthipeptide(s) for LDO05_RS02095

LDO05_RS02075

Leader:

MLENRNPFIVFNQEAKMEALSPVLAEELIEVDLSIQGG

Core:

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

Core with dehydrations:

CysDhbDhbNDhbFDhbLDhaNYLGNNGGWCysDhbLDhbKECysQRDhaCysN

antiSMASH-DB 4.0 matches for LDO05_RS02075

100.0%

NZ_CP084530.1and 1 other:

NZ_CP084530.1 Lanthipeptides: LDO05_RS02075_lanthipeptide

Lanthipeptides: LDO05_RS02075_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

93.3%

NZ_LT985747.1and 1 other:

NZ_LT985747.1 Lanthipeptides: C8268_RS00165_lanthipeptide

Lanthipeptides: C8268_RS00165_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTFTLS+YLGN GGWCTLTKECQRSCN

1

CTTNTFTLSDYLGNKGGWCTLTKECQRSCN

30

80.0%

NZ_BJTV01000004.1and 1 other:

NZ_BJTV01000004.1 Lanthipeptides: TNCT1_RS10200_lanthipeptide

Lanthipeptides: TNCT1_RS10200_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ LGN+GGWCTLTKECQ +CN

1

CTTNTFSLSDALGNHGGWCTLTKECQANCN

30

with 99 more sequence matches

Only the first 10 are displayed here.

80.0%

NZ_BNBV01000031.1and 1 other:

NZ_BNBV01000031.1 Lanthipeptides: IE286_RS22995_lanthipeptide

Lanthipeptides: IE286_RS22995_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ LGN+GGWCTLTKECQ +CN

1

CTTNTFSLSDALGNSGGWCTLTKECQPNCN

30

80.0%

NZ_CP047419.1and 3 others:

NZ_CP047419.1 Lanthipeptides: GTU71_RS12805_lanthipeptideNZ_PSTO01000045.1 Lanthipeptides: C5C10_RS15590_lanthipeptideNZ_PSTO01000045.1 Lanthipeptides: C5C10_RS15590_lanthipeptide

Lanthipeptides: GTU71_RS12805_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSC

29

CTTNTFTLSN LGN GGWCTLT ECQ +C

1

CTTNTFTLSNVLGNQGGWCTLTVECQPNC

29

80.0%

NZ_CP107567.1and 3 others:

NZ_CP107567.1 Lanthipeptides: OGH68_RS19760_lanthipeptideNZ_CP107567.1 Lanthipeptides: OGH68_RS19760_lanthipeptideNZ_CP107567.1 Lanthipeptides: OGH68_RS19760_lanthipeptide

Lanthipeptides: OGH68_RS19760_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS++LGN GGWCTLTKECQ +CN

1

CTTNTFSLSDWLGNQGGWCTLTKECQPNCN

30

76.7%

NZ_AKXV01000031.1and 4 others:

NZ_AKXV01000031.1 Lanthipeptides: Y19_RS0109895_lanthipeptideNZ_JABBGE010000004.1 Lanthipeptides: HHL19_RS13545_lanthipeptideNZ_LMEI01000006.1 Lanthipeptides: ASC82_RS06140_lanthipeptideNZ_LMEI01000006.1 Lanthipeptides: ASC82_RS06140_lanthipeptide

Lanthipeptides: Y19_RS0109895_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

C+TNTF+LS++LGN GGWCTLTKECQ +CN

1

CSTNTFSLSDFLGNQGGWCTLTKECQPNCN

30

76.7%

NZ_BMMP01000005.1and 3 others:

NZ_BMMP01000005.1 Lanthipeptides: IEY56_RS28370_lanthipeptideNZ_FMHJ01000003.1 Lanthipeptides: H181DRAFT_RS07545_lanthipeptideNZ_FMHJ01000003.1 Lanthipeptides: H181DRAFT_RS07545_lanthipeptide

Lanthipeptides: IEY56_RS28370_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ LGN GGWCTLT ECQ +CN

1

CTTNTFSLSDVLGNTGGWCTLTVECQPNCN

30

76.7%

NZ_BNCA01000011.1and 1 other:

NZ_BNCA01000011.1 Lanthipeptides: IE314_RS15865_lanthipeptide

Lanthipeptides: IE314_RS15865_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ +GN+GGWCTLTKECQ +CN

1

CTTNTFSLSDAVGNHGGWCTLTKECQPNCN

30

76.7%

NZ_CP016795.1and 5 others:

NZ_CP016795.1 Lanthipeptides: BC342_RS18360_lanthipeptideNZ_CP036534.1 Lanthipeptides: EZV63_RS18960_lanthipeptideNZ_CP036534.1 Lanthipeptides: EZV63_RS18960_lanthipeptideNZ_CP094676.1 Lanthipeptides: L6J92_RS01495_lanthipeptideNZ_CP094676.1 Lanthipeptides: L6J92_RS01495_lanthipeptide

Lanthipeptides: BC342_RS18360_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ LGN+GGWCTLTKECQ +C+

1

CTTNTFSLSDALGNHGGWCTLTKECQPNCS

30

76.7%

NZ_CP043317.1and 1 other:

NZ_CP043317.1 Lanthipeptides: FYC74_RS17680_lanthipeptide

Lanthipeptides: FYC74_RS17680_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ LGN+GGWCTLTKECQ +C+

1

CTTNTFSLSDSLGNHGGWCTLTKECQPNCS

30

76.7%

NZ_MJEJ02000054.1and 3 others:

NZ_MJEJ02000054.1 Lanthipeptides: BH683_RS28205_lanthipeptideNZ_QJSP01000005.1 Lanthipeptides: DFR67_RS09500_lanthipeptideNZ_QJSP01000005.1 Lanthipeptides: DFR67_RS09500_lanthipeptide

Lanthipeptides: BH683_RS28205_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSC

29

CTTNTFTLS++LGN+GGWCTLTKE Q +C

1

CTTNTFTLSDFLGNDGGWCTLTKESQNNC

29

73.3%

NZ_JAASAG010000001.1and 1 other:

NZ_JAASAG010000001.1 Lanthipeptides: HCC61_RS30395_lanthipeptide

Lanthipeptides: HCC61_RS30395_lanthipeptide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LS+ L N GGWCTLT ECQ +CN

1

CTTNTFSLSDALTNTGGWCTLTVECQPNCN

30

MIBiG 4.0 matches for LDO05_RS02075

86.7%

BGC0002110.3 (QKV49893.1):

Lanthipeptide: birimositide

1

CTTNTFTLSNYLGNNGGWCTLTKECQRSCN

30

CTTNTF+LSN LGNNGGWCTLTKECQ +CN

1

CTTNTFSLSNALGNNGGWCTLTKECQPNCN

30

46.7%

BGC0000517.4 (BAB04173.1):

Lanthipeptide: haloduracin β or haloduracin α

6

FTLSNYLGNNGGWCTLTKECQRSCN

30

+ +S LGN G +CTLT EC SCN

4

YNISCRLGNKGAYCTLTVECMPSCN

28

23.1%

BGC0001229.4 (SBI_06990):

Lanthipeptide: SBI-06990 A1 or SBI-06989 A2

19

CTLTKECQRSCN

30

CTL+KECQ +CN

28

CTLSKECQPNCN

39

with 1 more sequence matches

10.0%

BGC0000503.5 (cinA):

Lanthipeptide: cinnamycin

25

CQRSCN

30

C++SC+

1

CRQSCS

6

LDO05_RS02090

Leader:

MTKREIRREVLANNTFICEKEERELQDKVGA

Core:

AIPITTSSWICGVASAAFCPSTACTSKC

Core with dehydrations:

AIPIDhbDhbDhaDhaWICysGVADhaAAFCysPDhaDhbACysDhbDhaKCys

antiSMASH-DB 4.0 matches for LDO05_RS02090

100.0%

NZ_CP084530.1and 1 other:

NZ_CP084530.1 Lanthipeptides: LDO05_RS02090_lanthipeptide

Lanthipeptides: LDO05_RS02090_lanthipeptide

1

AIPITTSSWICGVASAAFCPSTACTSKC

28

AIPITTSSWICGVASAAFCPSTACTSKC

1

AIPITTSSWICGVASAAFCPSTACTSKC

28

64.5%

NZ_LT985747.1and 1 other:

NZ_LT985747.1 Lanthipeptides: C8268_RS00150_lanthipeptide

Lanthipeptides: C8268_RS00150_lanthipeptide

1

AIPITTSSWICGVASAAFCPSTACTSKC

28

A+ ITTSSWICG +AA CPSTACT C

4

ALGITTSSWICGFVTAALCPSTACTGDC

31

53.1%

NZ_CP006058.1and 25 others:

NZ_CP006058.1 Lanthipeptides: BAMY6639_RS19790_lanthipeptideNZ_CP021892.1 Lanthipeptides: S100333_RS03330_lanthipeptideNZ_CP021892.1 Lanthipeptides: S100333_RS03330_lanthipeptideNZ_CP026533.1 Lanthipeptides: C3438_RS12920_lanthipeptideNZ_CP026533.1 Lanthipeptides: C3438_RS12920_lanthipeptideNZ_CP028961.1 Lanthipeptides: DBK22_RS18410_lanthipeptideNZ_CP028961.1 Lanthipeptides: DBK22_RS18410_lanthipeptideNZ_CP032855.1 Lanthipeptides: D9C11_RS14705_lanthipeptideNZ_CP032855.1 Lanthipeptides: D9C11_RS14705_lanthipeptideNZ_CP044132.1 Lanthipeptides: F5K02_RS03575_lanthipeptideNZ_CP044132.1 Lanthipeptides: F5K02_RS03575_lanthipeptideNZ_CP061087.1 Lanthipeptides: IAR44_RS03180_lanthipeptideNZ_CP061087.1 Lanthipeptides: IAR44_RS03180_lanthipeptideNZ_CP063276.1 Lanthipeptides: IM743_RS02810_lanthipeptideNZ_CP063276.1 Lanthipeptides: IM743_RS02810_lanthipeptideNZ_CP065791.1 Lanthipeptides: I8N73_RS03410_lanthipeptideNZ_CP065791.1 Lanthipeptides: I8N73_RS03410_lanthipeptideNZ_CP074348.1 Lanthipeptides: KHA74_RS03215_lanthipeptideNZ_CP074348.1 Lanthipeptides: KHA74_RS03215_lanthipeptideNZ_CP083943.1 Lanthipeptides: LCH16_RS03235_lanthipeptideNZ_CP083943.1 Lanthipeptides: LCH16_RS03235_lanthipeptideNZ_JAAHBR010000013.1 Lanthipeptides: G3T15_RS10980_lanthipeptideNZ_JAAHBR010000013.1 Lanthipeptides: G3T15_RS10980_lanthipeptideNZ_JAQEMJ010000013.1 Lanthipeptides: PGW53_RS15460_lanthipeptideNZ_JAQEMJ010000013.1 Lanthipeptides: PGW53_RS15460_lanthipeptide

Lanthipeptides: BAMY6639_RS19790_lanthipeptide

5

TTSSWICGV-ASAAFCPSTACTSKC

28

T SS CGV +AAFCPST CTS C

8

TPSSLPCGVFVTAAFCPSTKCTSSC

32

with 102 more sequence matches

Only the first 10 are displayed here.

50.0%

NZ_CP013862.1and 1 other:

NZ_CP013862.1 Lanthipeptides: AOX59_RS09365_lanthipeptide

Lanthipeptides: AOX59_RS09365_lanthipeptide

5

TTSSWICGVA-SAAFCPSTACTSKC

28

T SS CG+A SA FCP+T CTS+C

8

TPSSVACGIAVSALFCPTTKCTSQC

32

50.0%

NZ_FOBE01000018.1:

Lanthipeptides: BMW61_RS21935_lanthipeptide

1

AIPITTSSWICGVASAAFCPSTACTSKC

28

+PIT I AS AFCPS C+SKC

5

GVPITVPITI--AASTAFCPSIKCSSKC

30

46.4%

NZ_CP025249.1and 1 other:

NZ_CP025249.1 Lanthipeptides: CWT12_RS00390_lanthipeptide

Lanthipeptides: CWT12_RS00390_lanthipeptide

5

TTSSWICGVA-SAAFCPSTACTSKC

28

T SSW CG+ + CP+ AC+SKC

3

TPSSWPCGIGITTTVCPTAACSSKC

27

46.4%

NZ_CP039292.1and 1 other:

NZ_CP039292.1 Lanthipeptides: E4J16_RS14990_lanthipeptide

Lanthipeptides: E4J16_RS14990_lanthipeptide

5

TTSSWICGVA-SAAFCPSTACTSKC

28

T SSW CG+ + CP+ CTSKC

3

TPSSWPCGIGITTTICPTAVCTSKC

27

46.4%

NZ_PCGR01000003.1and 1 other:

NZ_PCGR01000003.1 Lanthipeptides: CQS04_RS09625_lanthipeptide

Lanthipeptides: CQS04_RS09625_lanthipeptide

1

AIPITTSSWICGVASAAFCPSTACTSKC

28

A P + I G SA CP+TACT C

1

ATPTIVITAITGYISANSCPTTACTRAC

28

44.7%

NC_006322.1and 7 others:

NC_006322.1 Lanthipeptides: BLI_RS20290_lanthipeptideNZ_CP033218.1 Lanthipeptides: D9Y32_RS07810_lanthipeptideNZ_CP033218.1 Lanthipeptides: D9Y32_RS07810_lanthipeptideNZ_LQYL01000021.1 Lanthipeptides: B4090_RS08830_lanthipeptideNZ_LQYL01000021.1 Lanthipeptides: B4090_RS08830_lanthipeptideNZ_NIMP01000036.1 Lanthipeptides: CHCC14566_RS11870_lanthipeptideNZ_NIMP01000036.1 Lanthipeptides: CHCC14566_RS11870_lanthipeptide

Lanthipeptides: BLI_RS20290_lanthipeptide

3

PITTSSWICGVA----SAAFCPSTACTSKC

28

P TTSSW C A SA+ CP+T CTS+C

9

PATTSSWTCITAGVTVSASLCPTTKCTSRC

38

43.8%

NC_021362.1and 29 others:

NC_021362.1 Lanthipeptides: BALI_RS00915_lanthipeptideNZ_AP025342.1 Lanthipeptides: L6430_RS07475_lanthipeptideNZ_AP025342.1 Lanthipeptides: L6430_RS07475_lanthipeptideNZ_CABJBE010000012.1 Lanthipeptides: FY264_RS20090_lanthipeptideNZ_CABJBE010000012.1 Lanthipeptides: FY264_RS20090_lanthipeptideNZ_CP010524.1 Lanthipeptides: SC10_RS00915_lanthipeptideNZ_CP010524.1 Lanthipeptides: SC10_RS00915_lanthipeptideNZ_CP020352.1 Lanthipeptides: BLMD_RS01010_lanthipeptideNZ_CP020352.1 Lanthipeptides: BLMD_RS01010_lanthipeptideNZ_CP023168.1 Lanthipeptides: CK945_RS01010_lanthipeptideNZ_CP023168.1 Lanthipeptides: CK945_RS01010_lanthipeptideNZ_CP118744.1 Lanthipeptides: PWG69_RS01010_lanthipeptideNZ_CP118744.1 Lanthipeptides: PWG69_RS01010_lanthipeptideNZ_JAHHXA010000013.1 Lanthipeptides: KM899_RS20270_lanthipeptideNZ_JAHHXA010000013.1 Lanthipeptides: KM899_RS20270_lanthipeptideNZ_KN125579.1 Lanthipeptides: DJ88_RS03665_lanthipeptideNZ_KN125579.1 Lanthipeptides: DJ88_RS03665_lanthipeptideNZ_NIKL01000035.1 Lanthipeptides: CHCC20347_RS19045_lanthipeptideNZ_NIKL01000035.1 Lanthipeptides: CHCC20347_RS19045_lanthipeptideNZ_NIKT01000033.1 Lanthipeptides: CHCC20333_RS16135_lanthipeptideNZ_NIKT01000033.1 Lanthipeptides: CHCC20333_RS16135_lanthipeptideNZ_NILF01000041.1 Lanthipeptides: CHCC15381_RS11925_lanthipeptideNZ_NILF01000041.1 Lanthipeptides: CHCC15381_RS11925_lanthipeptideNZ_NIMP01000010.1 Lanthipeptides: CHCC14566_RS01510_lanthipeptideNZ_NIMP01000010.1 Lanthipeptides: CHCC14566_RS01510_lanthipeptideNZ_NKBC01000001.1 Lanthipeptides: CE036_RS00070_lanthipeptideNZ_NKBC01000001.1 Lanthipeptides: CE036_RS00070_lanthipeptideNZ_QXII01000007.1 Lanthipeptides: D1791_RS21810_lanthipeptideNZ_QXII01000007.1 Lanthipeptides: D1791_RS21810_lanthipeptide

Lanthipeptides: BALI_RS00915_lanthipeptide

5

TTSSWICG-VASAAFCPSTACTSKC

28

T SS CG + +A +CPS ACTS C

8

TPSSLPCGTLVTAVWCPSNACTSDC

32

43.6%

NZ_CP009280.1and 1 other:

NZ_CP009280.1 Lanthipeptides: P40081_RS37160_lanthipeptide

Lanthipeptides: P40081_RS37160_lanthipeptide

3

PITTSSWICGVA----SAAFCPSTACTSKC

28

P+TTSSW C + SA CP+T CTSKC

10

PLTTSSWPCVIGAVDISANLCPTTKCTSKC

39

41.4%

NZ_CP040938.1and 1 other:

NZ_CP040938.1 Lanthipeptides: B5772_RS02455_lanthipeptide

Lanthipeptides: B5772_RS02455_lanthipeptide

4

ITTSSWICGVASAAFCPSTACTSKC

28

ITTS +AS A CP+ C++KC

1

ITTSIPCAVMASTAICPTLVCSNKC

25

41.4%

NZ_JABBGE010000004.1and 1 other:

NZ_JABBGE010000004.1 Lanthipeptides: HHL19_RS13570_lanthipeptide

Lanthipeptides: HHL19_RS13570_lanthipeptide

7

SSWICGVA-------SAAFCPSTACTSKC

28

++W C V SA+ CP+T CTS+C

1

TTWSCAVVTAVATLVSASACPTTKCTSQC

29

MIBiG 4.0 matches for LDO05_RS02090

32.1%

BGC0002110.3 (QKV49894.1):

Lanthipeptide: birimositide

18

FCPSTACTSKC

28

FCP+T CTSKC

16

FCPTTKCTSKC

26

29.7%

BGC0001229.4 (SBI_06989):

Lanthipeptide: SBI-06990 A1 or SBI-06989 A2

15

SAAFCPSTACTSKC

28

SAAFCP+T CTS+C

24

SAAFCPTTKCTSRC

37

allorf_0460692_0460856

Leader:

MKVQVLILVKMISQASHIIPLYKYVLSKNLLEKKHRPAA

Core:

SRSCMAVLSHILDAI

Core with dehydrations:

DhaRDhaCysMAVLDhaHILDAI

antiSMASH-DB 4.0 matches for allorf_0460692_0460856

100.0%

NZ_CP084530.1and 1 other:

NZ_CP084530.1 Lanthipeptides: allorf_0460692_0460856_lanthipeptide

Lanthipeptides: allorf_0460692_0460856_lanthipeptide

1

SRSCMAVLSHILDAI

15

SRSCMAVLSHILDAI

1

SRSCMAVLSHILDAI

15

allorf_0461347_0461490

Leader:

MLKMKEVLSFLPIDLKEWSKAETWGLLQKSPGS

Core:

IPISESICTPPDIL

Core with dehydrations:

IPIDhaEDhaICysDhbPPDIL

antiSMASH-DB 4.0 matches for allorf_0461347_0461490

100.0%

NZ_CP084530.1and 1 other:

NZ_CP084530.1 Lanthipeptides: allorf_0461347_0461490_lanthipeptide

Lanthipeptides: allorf_0461347_0461490_lanthipeptide

1

IPISESICTPPDIL

14

IPISESICTPPDIL

1

IPISESICTPPDIL

14

18.8%

NC_014479.1and 9 others:

NZ_CP026362.1 Lanthipeptides: BV11031_RS00400_lanthipeptideNZ_CP033052.1 Lanthipeptides: D9779_RS17315_lanthipeptideNZ_CP051464.1 Lanthipeptides: HC660_RS17030_lanthipeptideNZ_JALAKK010000002.1 Lanthipeptides: MOB09_RS02800_lanthipeptideNZ_JALAKO010000014.1 Lanthipeptides: MOB26_RS08535_lanthipeptideNZ_JALAOG010000003.1 Lanthipeptides: MOC96_RS02500_lanthipeptideNZ_JALAPG010000043.1 Lanthipeptides: MOC70_RS16815_lanthipeptideNZ_JALAQI010000009.1 Lanthipeptides: MOD13_RS06065_lanthipeptideNZ_NXEM01000027.1 Lanthipeptides: CPT06_RS15285_lanthipeptide

Lanthipeptides: BSUW23_RS16845_lanthipeptide

4

SESICTPPDI

13

SES+CTP +

3

SESLCTPGCV

12

18.8%

NC_016047.1and 6 others:

NZ_CP025079.1 Lanthipeptides: BVQ_RS17705_lanthipeptideNZ_CP047644.1 Lanthipeptides: GNE05_RS17275_lanthipeptideNZ_CP099859.1 Lanthipeptides: NIZ95_RS16280_lanthipeptideNZ_CP101621.1 Lanthipeptides: NN913_RS16115_lanthipeptideNZ_KZ848487.1 Lanthipeptides: DSL71_RS15965_lanthipeptideNZ_MUXL01000003.1 Lanthipeptides: B0W20_RS12275_lanthipeptide

Lanthipeptides: GYO_RS39160_lanthipeptide

4

SESICTP

10

SES+CTP

3

SESVCTP

9

with 3 more sequence matches

18.8%

NZ_CP021903.1and 20 others:

NZ_CP023409.1 Lanthipeptides: Bateq7PJ16_RS18530_lanthipeptideNZ_CP026036.1 Lanthipeptides: C2H93_RS15000_lanthipeptideNZ_CP028218.1 Lanthipeptides: C7M30_RS14555_lanthipeptideNZ_CP035167.1 Lanthipeptides: EQJ08_RS17140_lanthipeptideNZ_CP035226.1 Lanthipeptides: EQW70_RS18175_lanthipeptideNZ_CP045006.1 Lanthipeptides: F9B13_RS03875_lanthipeptideNZ_CP076083.1 Lanthipeptides: KFF76_RS16710_lanthipeptideNZ_CP079759.1 Lanthipeptides: KXZ66_RS17780_lanthipeptideNZ_CP080508.1 Lanthipeptides: K0V03_RS06525_lanthipeptideNZ_CP089148.1 Lanthipeptides: LRO88_RS19055_lanthipeptideNZ_JALAUA010000003.1 Lanthipeptides: MOD32_RS04985_lanthipeptideNZ_JALAVX010000009.1 Lanthipeptides: MOE40_RS09385_lanthipeptideNZ_JAMYDW010000007.1 Lanthipeptides: NHM07_RS16180_lanthipeptideNZ_JAQOXM010000001.1 Lanthipeptides: PO770_RS03875_lanthipeptideNZ_NJRD01000003.1 Lanthipeptides: CE053_RS07200_lanthipeptideNZ_NJRE01000008.1 Lanthipeptides: CE047_RS18435_lanthipeptideNZ_SORJ01000001.1 Lanthipeptides: BJ795_RS01490_lanthipeptideNZ_VFNF01000001.1 Lanthipeptides: FB592_RS01525_lanthipeptideNZ_VIOH01000001.1 Lanthipeptides: FLN47_RS03850_lanthipeptideNZ_VLJL01000012.1 Lanthipeptides: L604_RS09425_lanthipeptide

Lanthipeptides: CD007_RS17065_lanthipeptide

4

SESICTP

10

SES+CTP

3

SESLCTP

9

18.8%

NZ_JAMDIB010000004.1:

Lanthipeptides: M5P35_RS04030_lanthipeptide

4

SESICTPPD

12

S+S+CTPP

3

SKSLCTPPG

11

13.7%

NZ_JADMPO010000001.1:

Lanthipeptides: allorf_303731_303931_lanthipeptide

1

IPISESICTPP

11

IPIS C+PP

8

IPISNLFCSPP

18

allorf_0463481_0463591

Leader:

MRLKSPFCIIIFYFFIIINYTLHGS

Core:

SCKYWIASLLP

Core with dehydrations:

DhaCysKYWIADhaLLP

antiSMASH-DB 4.0 matches for allorf_0463481_0463591

100.0%

NZ_CP084530.1and 1 other:

NZ_CP084530.1 Lanthipeptides: allorf_0463481_0463591_lanthipeptide

Lanthipeptides: allorf_0463481_0463591_lanthipeptide

1

SCKYWIASLLP

11

SCKYWIASLLP

1

SCKYWIASLLP

11

14.3%

NZ_ML219773.1:

Lanthipeptides: allorf_1335288_1335458_lanthipeptide

3

KYWIASLLP

11

+YW+ L+P

13

RYWVDRLVP

21

12.1%

NZ_MKZS01000001.1:

Lanthipeptides: allorf_3081872_3082018_lanthipeptide

4

YWIASLLP

11

+WI+ +LP

20

FWISDMLP

27

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Transcription Factor Binding Sites

Binding sites found:

ANR

Description: Anaerobic transcriptional regulator
Species: Pseudomonas putida KT2440
Score: 26.33 out of 26.33

Confidence: strong

CcpA

Description: Catabolite control protein A
Species: Streptococcus & Clostridium sp.
Score: 17.96 out of 20.97

Confidence: medium

ZuR variant 1

Description: Zinc-responsive repressor
Species: Streptomyces coelicolor
Score: 21.67 out of 28.19

Confidence: medium

Additional weak hits (5):

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 20.86 out of 26.06

Confidence: weak

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 21.35 out of 28.14

Confidence: weak

ArcA

Description: Repressor of carbon oxidation
Species: Escherichia coli str. K-12 substr. MG1655
Score: 18.45 out of 21.55

Confidence: weak

HgtR

Description: Hydrogen-dependent regulator
Species: Geobacter sulfurreducens PCA
Score: 23.30 out of 36.54

Confidence: weak

ClgR

Description: Caseinolytic protease gene regulator
Species: Corynebacterium glutamicum ATCC 13032
Score: 21.27 out of 30.22

Confidence: weak

Lanthipeptides

TFBS Finder

Core peptide predictions

LDO05_RS02075 - Class II

Cleavage pHMM score: -3.80

RODEO score: 0

Monoisotopic mass: 3184.4 Da

Molecular weight: 3186.5 Da

Number of bridges: 4

Alternative weights: (assuming N unmodified Ser/Thr residues); 3204.5 Da N = 1; 3222.5 Da N = 2; 3240.6 Da N = 3; 3258.6 Da N = 4

LDO05_RS02090 - Class II

Cleavage pHMM score: -1.60

RODEO score: 0

Monoisotopic mass: 2613.3 Da

Molecular weight: 2615.0 Da

Number of bridges: 4

Alternative weights: (assuming N unmodified Ser/Thr residues); 2633.1 Da N = 1; 2651.1 Da N = 2; 2669.1 Da N = 3; 2687.1 Da N = 4; 2705.1 Da N = 5

allorf_0460692_0460856 - Class II

Cleavage pHMM score: -6.90

RODEO score: 0

Monoisotopic mass: 1560.8 Da

Molecular weight: 1561.9 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 1579.9 Da N = 1; 1597.9 Da N = 2

allorf_0461347_0461490 - Class II

Cleavage pHMM score: -6.00

RODEO score: 0

Monoisotopic mass: 1442.8 Da

Molecular weight: 1443.7 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 1461.7 Da N = 1; 1479.7 Da N = 2

allorf_0463481_0463591 - Class II

Cleavage pHMM score: -5.60

RODEO score: 0

Monoisotopic mass: 1243.7 Da

Molecular weight: 1244.5 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 1262.5 Da N = 1

LDO05_RS02075 - Class II

Cleavage pHMM score: -3.80

RODEO score: 0

Monoisotopic mass: 3184.4 Da

Molecular weight: 3186.5 Da

Number of bridges: 4

Alternative weights: (assuming N unmodified Ser/Thr residues); 3204.5 Da N = 1; 3222.5 Da N = 2; 3240.6 Da N = 3; 3258.6 Da N = 4

LDO05_RS02090 - Class II

Cleavage pHMM score: -1.60

RODEO score: 0

Monoisotopic mass: 2613.3 Da

Molecular weight: 2615.0 Da

Number of bridges: 4

Alternative weights: (assuming N unmodified Ser/Thr residues); 2633.1 Da N = 1; 2651.1 Da N = 2; 2669.1 Da N = 3; 2687.1 Da N = 4; 2705.1 Da N = 5

allorf_0460692_0460856 - Class II

Cleavage pHMM score: -6.90

RODEO score: 0

Monoisotopic mass: 1560.8 Da

Molecular weight: 1561.9 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 1579.9 Da N = 1; 1597.9 Da N = 2

allorf_0461347_0461490 - Class II

Cleavage pHMM score: -6.00

RODEO score: 0

Monoisotopic mass: 1442.8 Da

Molecular weight: 1443.7 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 1461.7 Da N = 1; 1479.7 Da N = 2

allorf_0463481_0463591 - Class II

Cleavage pHMM score: -5.60

RODEO score: 0

Monoisotopic mass: 1243.7 Da

Molecular weight: 1244.5 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 1262.5 Da N = 1

TFBS definitions

Regulator	Description
ANR	Anaerobic transcriptional regulator
CcpA	Catabolite control protein A
ZuR variant 1	Zinc-responsive repressor

NZ_CP084530.1 - Region 4 - proteusin

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Location: 884,917 - 905,156 nt. (total: 20,240 nt) Show pHMM detection rules used

proteusin: (PoyD or TIGR03793)

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core biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Hydrolases: glucosidase

LDO05_RS04060: Alpha-glucosidase

smcogs: SMCOG1257: Alpha-glucosidase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002285.2	0.44	ribosomal	aborycin	Streptomyces sp. ZS0098
BGC0001810.3	0.36	PKS	trehangelin	Polymorphospora rubra
BGC0001735.5	0.30	other (other)	pentostatine, vidarabine	Streptomyces antibioticus
BGC0000905.5	0.29	other (other)	heme D1	Heliobacillus mobilis
BGC0002571.2	0.29	NRPS	pyoverdine DC3000	Pseudomonas syringae pv. tomato str. DC3000
BGC0002122.2	0.25	NRPS	gramicidin S	Aneurinibacillus migulanus
BGC0000804.5	0.25	saccharide	acarviostatin I03, acarviostatin II03, acarviostatin III03, acarviostatin IV03	Streptomyces coelicoflavus ZG0656
BGC0001728.4	0.24	NRPS, PKS	paenilipoheptin	Paenibacillus polymyxa E681
BGC0001011.5	0.23	NRPS, PKS	meridamycin	Streptomyces sp. NRRL 30748
BGC0001812.3	0.22	PKS	tylactone	Micromonospora chalcea subsp. izumensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002285.2	0.44	ribosomal	aborycin	Streptomyces sp. ZS0098
BGC0001810.3	0.36	PKS	trehangelin	Polymorphospora rubra
BGC0001735.5	0.30	other (other)	pentostatine, vidarabine	Streptomyces antibioticus
BGC0000905.5	0.29	other (other)	heme D1	Heliobacillus mobilis
BGC0002571.2	0.29	NRPS	pyoverdine DC3000	Pseudomonas syringae pv. tomato str. DC3000
BGC0002122.2	0.25	NRPS	gramicidin S	Aneurinibacillus migulanus
BGC0000804.5	0.25	saccharide	acarviostatin I03, acarviostatin II03, acarviostatin III03, acarviostatin IV03	Streptomyces coelicoflavus ZG0656
BGC0001728.4	0.24	NRPS, PKS	paenilipoheptin	Paenibacillus polymyxa E681
BGC0001011.5	0.23	NRPS, PKS	meridamycin	Streptomyces sp. NRRL 30748
BGC0001812.3	0.22	PKS	tylactone	Micromonospora chalcea subsp. izumensis

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Transcription Factor Binding Sites

Binding sites found:

CcpA

Description: Catabolite control protein A
Species: Streptococcus & Clostridium sp.
Score: 19.05 out of 20.97

Confidence: strong

CodY

Description: Regulator of stationary phase and virulence in Gram-positive bacteria
Species: Bacillus, Lactococcus & Streptococcus sp.
Score: 20.81 out of 27.78

Confidence: medium

Additional weak hits (5):

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 21.98 out of 28.14

Confidence: weak

MntR

Description: Manganese transport regulator
Species: Escherichia coli str. K-12 substr. MG1655
Score: 23.88 out of 39.62

Confidence: weak

HgtR

Description: Hydrogen-dependent regulator
Species: Geobacter sulfurreducens PCA
Score: 24.73 out of 36.54

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 20.30 out of 26.06

Confidence: weak

NrtR

Description: NAD synthesis repressor
Species: Streptomyces coelicolor
Score: 24.40 out of 35.63

Confidence: weak

TFBS Finder

TFBS definitions

Regulator	Description
CcpA	Catabolite control protein A
CodY	Regulator of stationary phase and virulence in Gram-positive bacteria

NZ_CP084530.1 - Region 5 - terpene-precursor

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Location: 1,704,292 - 1,725,167 nt. (total: 20,876 nt) Show pHMM detection rules used

terpene-precursor: (PT_FPPS_like and not PT_HPP)

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Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Transferases: carboxylase

LDO05_RS07945: acetyl-CoA carboxylase biotin carboxylase

smcogs: SMCOG1090: acetyl-CoA carboxylase biotin carboxylase

Ligases: synthase synthetase

LDO05_RS07985: Polyprenyl synthetase

smcogs: SMCOG1182: Polyprenyl synthetase

LDO05_RS07990: 1-deoxy-D-xylulose-5-phosphate synthase

smcogs: SMCOG1110: 1-deoxy-D-xylulose-5-phosphate synthase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001361.3	0.49	terpene	sodorifen	Serratia plymuthica 4Rx13
BGC0002283.2	0.49	terpene	sodorifen	Serratia plymuthica
BGC0002397.2	0.47	terpene	astallatene	Arabidopsis thaliana
BGC0002400.2	0.44	terpene	boleracene	Brassica oleracea var. oleracea
BGC0002219.2	0.39	terpene	(-)-(R)-nephthenol	Stereum hirsutum FP-91666 SS1
BGC0002398.2	0.39	terpene	(-)-ent-quiannulatene	Arabidopsis thaliana
BGC0002284.3	0.38	other (other)	corynecin III, corynecin I, corynecin II	Rhodococcus sp. H-CA8f
BGC0000665.5	0.38	other (other), terpene	xiamycin, indosespene, sespenine, dixiamycin A, dixiamycin B, sulfadixiamycin A, sulfadixiamycin B, sulfadixiamycin C	Streptomyces sp. HKI0576
BGC0001594.3	0.37	other (other)	fischerindole L	Fischerella muscicola UTEX 1829
BGC0000666.5	0.36	terpene	xiamycin A	Streptomyces sp. SCSIO 02999

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001361.3	0.49	terpene	sodorifen	Serratia plymuthica 4Rx13
BGC0002283.2	0.49	terpene	sodorifen	Serratia plymuthica
BGC0002397.2	0.47	terpene	astallatene	Arabidopsis thaliana
BGC0002400.2	0.44	terpene	boleracene	Brassica oleracea var. oleracea
BGC0002219.2	0.39	terpene	(-)-(R)-nephthenol	Stereum hirsutum FP-91666 SS1
BGC0002398.2	0.39	terpene	(-)-ent-quiannulatene	Arabidopsis thaliana
BGC0002284.3	0.38	other (other)	corynecin III, corynecin I, corynecin II	Rhodococcus sp. H-CA8f
BGC0000665.5	0.38	other (other), terpene	xiamycin, indosespene, sespenine, dixiamycin A, dixiamycin B, sulfadixiamycin A, sulfadixiamycin B, sulfadixiamycin C	Streptomyces sp. HKI0576
BGC0001594.3	0.37	other (other)	fischerindole L	Fischerella muscicola UTEX 1829
BGC0000666.5	0.36	terpene	xiamycin A	Streptomyces sp. SCSIO 02999

Similar known clusters from MIBiG 4.0

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Subclass	Product name	Chain length	Initial cyclisations	Functional groups
sesquiterpene precursor		FPP	C15	acyclic	PP

Genes with terpene domains:

LDO05_RS07985: PT_FPPS_like

Domain 1 (26 - 291): Prenyltransferase; Farnesyl diphosphate synthase like

Subtype: Farnesyl diphosphate synthase, bacterial

Reactions:: IPP, DMAPP → FPP

Transcription Factor Binding Sites

Binding sites found:

ToxT

Description: Regulator of MSHA biosynthesis
Species: Vibrio cholerae O395
Score: 18.04 out of 18.57

Confidence: strong

BldD

Description: Development and antibiotic global regulator
Species: Streptomyces coelicolor
Score: 20.49 out of 23.43

Confidence: medium

CodY

Description: Regulator of stationary phase and virulence in Gram-positive bacteria
Species: Bacillus, Lactococcus & Streptococcus sp.
Score: 20.84 out of 27.78

Confidence: medium

Additional weak hits (6):

HexR

Description: Glucose-responsive regulator
Species: Shewanella oneidensis MR-1
Score: 24.37 out of 31.73

Confidence: weak

ColR

Description: Phenol-responsive regulator
Species: Pseudomonas putida KT2440
Score: 22.13 out of 30.25

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 21.37 out of 26.06

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 19.98 out of 26.06

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 21.16 out of 26.06

Confidence: weak

NrtR

Description: NAD synthesis repressor
Species: Streptomyces coelicolor
Score: 22.10 out of 35.63

Confidence: weak

Terpene

TFBS Finder

Glossary

Acronym	Full name
DMAPP	Dimethylallyl diphosphate
FPP	Farnesyl diphosphate
IPP	Isopentenyl diphosphate
PP	Diphosphate

TFBS definitions

Regulator	Description
BldD	Development and antibiotic global regulator
CodY	Regulator of stationary phase and virulence in Gram-positive bacteria
ToxT	Regulator of MSHA biosynthesis

NZ_CP084530.1 - Region 6 - NI-siderophore

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Location: 1,993,010 - 2,024,674 nt. (total: 31,665 nt) Show pHMM detection rules used

NI-siderophore: IucA_IucC

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: dehydrogenase

LDO05_RS09510: dehydrogenase

smcogs: SMCOG1222: dehydrogenase

Hydrolases: deacetylase deaminase

LDO05_RS09445: ornithine cyclodeaminase

smcogs: SMCOG1158: ornithine cyclodeaminase

LDO05_RS09495: polysaccharide deacetylase

smcogs: SMCOG1235: polysaccharide deacetylase

Lyases: decarboxylase

LDO05_RS09465: diaminopimelate decarboxylase

smcogs: SMCOG1264: diaminopimelate decarboxylase

Ligases: synthase

LDO05_RS09440: cysteine synthase

smcogs: SMCOG1081: cysteine synthase

LDO05_RS09485: 2-isopropylmalate synthase

smcogs: SMCOG1271: 2-isopropylmalate synthase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000943.5	0.60	other (other)	staphyloferrin B	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000946.5	0.59	other (other)	vibrioferrin	Vibrio parahaemolyticus
BGC0001408.5	0.57	other (other)	xanthoferrin	Xanthomonas oryzae pv. oryzae KACC 10331
BGC0002527.2	0.57	other (other)	vibrioferrin	Azotobacter vinelandii CA
BGC0000942.4	0.56	other (other)	petrobactin	Bacillus anthracis str. Ames
BGC0001498.5	0.54	other (other)	aerobactin	Xenorhabdus szentirmaii DSM 16338
BGC0002692.2	0.53	other (other)	speibonoxamine, desoxy-desferrioxamine D1, desferrioxamine D1, desferrioxamine B, didesoxy-desferrioxamine D1, desoxy-desferrioxamine B, didesoxy-desferrioxamine B	Kribbella speibonae
BGC0001870.3	0.52	other (other)	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0001572.3	0.52	other (other)	desferrioxamine E	Pantoea agglomerans
BGC0000939.5	0.51	other (other)	aerobactin	Grimontia hollisae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000943.5	0.60	other (other)	staphyloferrin B	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000946.5	0.59	other (other)	vibrioferrin	Vibrio parahaemolyticus
BGC0001408.5	0.57	other (other)	xanthoferrin	Xanthomonas oryzae pv. oryzae KACC 10331
BGC0002527.2	0.57	other (other)	vibrioferrin	Azotobacter vinelandii CA
BGC0000942.4	0.56	other (other)	petrobactin	Bacillus anthracis str. Ames
BGC0001498.5	0.54	other (other)	aerobactin	Xenorhabdus szentirmaii DSM 16338
BGC0002692.2	0.53	other (other)	speibonoxamine, desoxy-desferrioxamine D1, desferrioxamine D1, desferrioxamine B, didesoxy-desferrioxamine D1, desoxy-desferrioxamine B, didesoxy-desferrioxamine B	Kribbella speibonae
BGC0001870.3	0.52	other (other)	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0001572.3	0.52	other (other)	desferrioxamine E	Pantoea agglomerans
BGC0000939.5	0.51	other (other)	aerobactin	Grimontia hollisae

Similar known clusters from MIBiG 4.0

Similar subclusters

No significant matches found.

Transcription Factor Binding Sites

Binding sites found:

FuR variant 1

Description: Ferric Uptake Regulator
Species: Bacillus, Pseudomonas, Yersinia sp.
Score: 26.61 out of 29.38

Confidence: strong

FuR variant 1

Description: Ferric Uptake Regulator
Species: Bacillus, Pseudomonas, Yersinia sp.
Score: 29.38 out of 29.38

Confidence: strong

FuR variant 1

Description: Ferric Uptake Regulator
Species: Bacillus, Pseudomonas, Yersinia sp.
Score: 27.37 out of 29.38

Confidence: strong

VqsM

Description: Regulator of quorum-sensing signalling systems
Species: Pseudomonas aeruginosa PAO1
Score: 19.00 out of 20.47

Confidence: strong

ToxT

Description: Regulator of MSHA biosynthesis
Species: Vibrio cholerae O395
Score: 18.04 out of 18.57

Confidence: strong

FuR variant 1

Description: Ferric Uptake Regulator
Species: Bacillus, Pseudomonas, Yersinia sp.
Score: 26.49 out of 29.38

Confidence: medium

FuR variant 1

Description: Ferric Uptake Regulator
Species: Bacillus, Pseudomonas, Yersinia sp.
Score: 25.34 out of 29.38

Confidence: medium

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 22.10 out of 26.06

Confidence: medium

ZuR variant 1

Description: Zinc-responsive repressor
Species: Streptomyces coelicolor
Score: 22.98 out of 28.19

Confidence: medium

ZuR variant 1

Description: Zinc-responsive repressor
Species: Streptomyces coelicolor
Score: 22.18 out of 28.19

Confidence: medium

Additional weak hits (12):

FuR variant 2

Description: Ferric Uptake Regulator
Species: Caulobacter crescentus CB15
Score: 23.61 out of 32.74

Confidence: weak

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 21.80 out of 28.14

Confidence: weak

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 21.80 out of 28.14

Confidence: weak

FuR variant 1

Description: Ferric Uptake Regulator
Species: Bacillus, Pseudomonas, Yersinia sp.
Score: 23.12 out of 29.38

Confidence: weak

FuR variant 2

Description: Ferric Uptake Regulator
Species: Caulobacter crescentus CB15
Score: 23.97 out of 32.74

Confidence: weak

FuR variant 1

Description: Ferric Uptake Regulator
Species: Bacillus, Pseudomonas, Yersinia sp.
Score: 21.36 out of 29.38

Confidence: weak

RicR

Description: Copper-responsive regulator
Species: Mycobacterium tuberculosis H37Rv
Score: 22.27 out of 32.93

Confidence: weak

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 20.58 out of 28.14

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 21.72 out of 26.06

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 20.83 out of 26.06

Confidence: weak

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 23.48 out of 28.14

Confidence: weak

CopR

Description: Copper-responsive regulator
Species: Lactococcus lactis subsp. lactis Il1403
Score: 22.07 out of 30.97

Confidence: weak

TFBS Finder

TFBS definitions

Regulator	Description
FuR variant 1	Ferric Uptake Regulator
MogR	Repressor of flagellar motility genes
ToxT	Regulator of MSHA biosynthesis
VqsM	Regulator of quorum-sensing signalling systems
ZuR variant 1	Zinc-responsive repressor

NZ_CP084530.1 - Region 7 - T3PKS,other

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Location: 2,097,249 - 2,156,641 nt. (total: 59,393 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)
other: (Neocarzinostat or bcpB or frbD or mitE or prnB or CaiA or bacilysin or orf2_PTase)

Legend:

core biosynthetic genes

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NRPS/PKS domains

Gene/CDS overview

Filter:

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: oxidoreductase

LDO05_RS09945: oxidoreductase

smcogs: SMCOG1161: oxidoreductase

LDO05_RS10075: oxidoreductase

smcogs: SMCOG1079: oxidoreductase

Transferases: aminotransferase

LDO05_RS10095: DegT/DnrJ/EryC1/StrS aminotransferase

smcogs: SMCOG1056: DegT/DnrJ/EryC1/StrS aminotransferase

LDO05_RS10100: DegT/DnrJ/EryC1/StrS aminotransferase

smcogs: SMCOG1056: DegT/DnrJ/EryC1/StrS aminotransferase

LDO05_RS10135: aminotransferase

smcogs: SMCOG1019: aminotransferase

Hydrolases: deacetylase hydrolase

LDO05_RS09900: beta-lactamase

smcogs: SMCOG1053: beta-lactamase

LDO05_RS10015: HAD-superfamily hydrolase, subfamily IA, variant

smcogs: SMCOG1115: HAD-superfamily hydrolase, subfamily IA, variant

LDO05_RS10020: alpha/beta hydrolase fold protein

smcogs: SMCOG1036: alpha/beta hydrolase fold protein

LDO05_RS10085: acetylornithine deacetylase

smcogs: SMCOG1247: acetylornithine deacetylase

Lyases: lyase

LDO05_RS10045: argininosuccinate lyase/adenylosuccinate lyase

smcogs: SMCOG1063: argininosuccinate lyase/adenylosuccinate lyase

LDO05_RS10050: argininosuccinate lyase/adenylosuccinate lyase

smcogs: SMCOG1063: argininosuccinate lyase/adenylosuccinate lyase

Ligases: synthase

LDO05_RS09955: chalcone and stilbene synthase domain protein

smcogs: SMCOG1024: chalcone and stilbene synthase domain protein

LDO05_RS10120: cysteine synthase

smcogs: SMCOG1081: cysteine synthase

Translocases: permease

LDO05_RS09940: phenylalanine-specific permease

smcogs: SMCOG1038: phenylalanine-specific permease

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001310.5	0.42	PKS	naringenin	Streptomyces clavuligerus ATCC 27064
BGC0002332.2	0.36	PKS	4-hydroxy-6-pentadecylpyran-2-one, 4-hydroxy-6-(2-oxoheptadecyl)pyran-2-one, Adipostatin A	Candidatus Entotheonella sp.
BGC0000387.5	0.35	NRPS	mangotoxin	Pseudomonas syringae pv. syringae
BGC0000888.5	0.31	other (other)	bacilysin	Bacillus sp. CS93
BGC0001184.4	0.30	other (other)	bacilysin	Bacillus velezensis FZB42
BGC0002573.2	0.29	other (other)	phosphoramidon	Streptomyces mozunensis
BGC0001077.4	0.29	PKS	6-anteisoheptadecyl-4-O-dihydrogeranyl-2-methoxyhydroquinone, 6-isoheptadecyl-4-O-dihydrogeranyl-2-methoxyhydroquinone, 6-isopalmityl-4-O-geranyl-2-methoxyhydroquinone, 6-palmityl-4-O-geranyl-2-methoxyhydroquinone, 6-anteisoheptadecyl-4-O-geranyl-2-methoxyhydroquinone, 6-isoheptadecyl-4-O-geranyl-2-methoxyhydroquinone, 6-isopalmityl-4-O-dihydrofarnesyl-2-methoxyhydroquinone, 6-palmityl-4-O-dihydrofarnesyl-2-methoxyhydroquinone, 6-anteisoheptadecyl-4-O-dihydrofarnesyl-2-methoxyhydroquinone, 6-isoheptadecyl-4-O-dihydrofarnesyl-2-methoxyhydroquinone	Actinoplanes missouriensis 431
BGC0002362.3	0.27	PKS	loseolamycin A1, loseolamycin A2	Micromonospora endolithica
BGC0000563.4	0.26	ribosomal	venezuelin	Streptomyces venezuelae ATCC 10712
BGC0001590.5	0.26	PKS	formicamycin A, formicamycin B, formicamycin C, formicamycin D, formicamycin E, formicamycin F, formicamycin G, formicamycin H, formicamycin I, formicamycin J, formicamycin K, formicamycin L, formicamycin M, fasamycin C, fasamycin D, fasamycin E	Streptomyces sp. KY5

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001310.5	0.53	PKS	naringenin	Streptomyces clavuligerus ATCC 27064
BGC0002332.2	0.49	PKS	4-hydroxy-6-pentadecylpyran-2-one, 4-hydroxy-6-(2-oxoheptadecyl)pyran-2-one, Adipostatin A	Candidatus Entotheonella sp.
BGC0000387.5	0.49	NRPS	mangotoxin	Pseudomonas syringae pv. syringae
BGC0000898.5	0.47	saccharide	desosamine, pikromycin, neomethymycin, narbomycin	Streptomyces venezuelae
BGC0002568.2	0.47	other (other)	Ethylenediaminesuccinic acid hydroxyarginine	Streptomyces scabiei 87.22
BGC0001184.4	0.46	other (other)	bacilysin	Bacillus velezensis FZB42
BGC0002487.3	0.46	other (other)	staphylopine	Staphylococcus aureus subsp. aureus Mu50
BGC0000899.4	0.46	saccharide	desosamine	Streptomyces narbonensis
BGC0002567.2	0.46	other (other)	EDHA	Streptomyces sp. MA5143a
BGC0001595.3	0.46	other (other)	fischerindole	Fischerella sp. SAG 46.79

Similar known clusters from MIBiG 4.0

Similar subclusters

No significant matches found.

Transcription Factor Binding Sites

Binding sites found:

ToxT

Description: Regulator of MSHA biosynthesis
Species: Vibrio cholerae O395
Score: 18.57 out of 18.57

Confidence: strong

ToxT

Description: Regulator of MSHA biosynthesis
Species: Vibrio cholerae O395
Score: 17.48 out of 18.57

Confidence: strong

ArcA

Description: Repressor of carbon oxidation
Species: Escherichia coli str. K-12 substr. MG1655
Score: 18.97 out of 21.55

Confidence: medium

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 23.06 out of 26.06

Confidence: medium

CodY

Description: Regulator of stationary phase and virulence in Gram-positive bacteria
Species: Bacillus, Lactococcus & Streptococcus sp.
Score: 21.54 out of 27.78

Confidence: medium

CodY

Description: Regulator of stationary phase and virulence in Gram-positive bacteria
Species: Bacillus, Lactococcus & Streptococcus sp.
Score: 21.32 out of 27.78

Confidence: medium

ZuR variant 1

Description: Zinc-responsive repressor
Species: Streptomyces coelicolor
Score: 21.00 out of 28.19

Confidence: medium

Additional weak hits (13):

HipB

Description: Bacterial antitoxin HipB
Species: Escherichia coli BL21(DE3)
Score: 23.57 out of 33.73

Confidence: weak

DmdR1

Description: Iron(II)-dependent repressor
Species: Streptomyces coelicolor
Score: 24.57 out of 36.53

Confidence: weak

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 21.91 out of 28.14

Confidence: weak

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 20.70 out of 28.14

Confidence: weak

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 22.47 out of 28.14

Confidence: weak

FuR variant 1

Description: Ferric Uptake Regulator
Species: Bacillus, Pseudomonas, Yersinia sp.
Score: 21.96 out of 29.38

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 20.38 out of 26.06

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 20.26 out of 26.06

Confidence: weak

FuR variant 2

Description: Ferric Uptake Regulator
Species: Caulobacter crescentus CB15
Score: 23.12 out of 32.74

Confidence: weak

DasR

Description: N-acetylglucosamine dependent repressor
Species: Streptomyces coelicolor
Score: 20.70 out of 27.04

Confidence: weak

HexR

Description: Glucose-responsive regulator
Species: Shewanella oneidensis MR-1
Score: 22.28 out of 31.73

Confidence: weak

ZuR variant 2

Description: Zinc-responsive repressor
Species: Pseudomonas protegens Pf-5
Score: 22.24 out of 33.14

Confidence: weak

LexA variant 3

Description: Repressor of DNA damage response
Species: Escherichia coli str. K-12 substr. MG1655
Score: 23.64 out of 32.93

Confidence: weak

Detailed domain annotation

Selected features only

Show module domains

TFBS Finder

TFBS definitions

Regulator	Description
ArcA	Repressor of carbon oxidation
CodY	Regulator of stationary phase and virulence in Gram-positive bacteria
MogR	Repressor of flagellar motility genes
ToxT	Regulator of MSHA biosynthesis
ZuR variant 1	Zinc-responsive repressor

NZ_CP084530.1 - Region 8 - opine-like-metallophore

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Location: 2,185,600 - 2,207,740 nt. (total: 22,141 nt) Show pHMM detection rules used

opine-like-metallophore: (CntL and CntM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

TFBS Finder

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

No tailoring functions detected.

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002488.3	0.82	other (other)	bacillopaline	Paenibacillus mucilaginosus KNP414
BGC0002487.3	0.79	other (other)	staphylopine	Staphylococcus aureus subsp. aureus Mu50
BGC0002489.2	0.53	other (other)	pseudopaline	Pseudomonas aeruginosa PAO1
BGC0002490.2	0.50	other (other)	yersinopine	Yersinia pestis CO92
BGC0000513.3	0.41	ribosomal	Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3	Saccharopolyspora erythraea NRRL 2338
BGC0000551.5	0.41	ribosomal	SapB	Streptomyces coelicolor A3(2)
BGC0000501.3	0.40	ribosomal	catenulipeptin	Catenulispora acidiphila DSM 44928
BGC0001639.3	0.40	ribosomal	klebsidin	Klebsiella pneumoniae
BGC0002698.2	0.39	ribosomal	phaeornamide	Pseudophaeobacter arcticus DSM 23566
BGC0000546.3	0.39	ribosomal	SAL-2242	Streptomyces albidoflavus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002488.3	0.82	other (other)	bacillopaline	Paenibacillus mucilaginosus KNP414
BGC0002487.3	0.79	other (other)	staphylopine	Staphylococcus aureus subsp. aureus Mu50
BGC0002489.2	0.53	other (other)	pseudopaline	Pseudomonas aeruginosa PAO1
BGC0002490.2	0.50	other (other)	yersinopine	Yersinia pestis CO92
BGC0000513.3	0.41	ribosomal	Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3	Saccharopolyspora erythraea NRRL 2338
BGC0000551.5	0.41	ribosomal	SapB	Streptomyces coelicolor A3(2)
BGC0000501.3	0.40	ribosomal	catenulipeptin	Catenulispora acidiphila DSM 44928
BGC0001639.3	0.40	ribosomal	klebsidin	Klebsiella pneumoniae
BGC0002698.2	0.39	ribosomal	phaeornamide	Pseudophaeobacter arcticus DSM 23566
BGC0000546.3	0.39	ribosomal	SAL-2242	Streptomyces albidoflavus

Similar known clusters from MIBiG 4.0

Similar subclusters

No significant matches found.

Transcription Factor Binding Sites

Binding sites found:

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 23.28 out of 26.06

Confidence: medium

AbrC3

Description: Antibiotic production activator
Species: Streptomyces coelicolor
Score: 18.16 out of 18.16

Confidence: strong

Additional weak hits (2):

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 20.48 out of 26.06

Confidence: weak

NrtR

Description: NAD synthesis repressor
Species: Streptomyces coelicolor
Score: 22.33 out of 35.63

Confidence: weak

TFBS Finder

TFBS definitions

Regulator	Description
AbrC3	Antibiotic production activator
MogR	Repressor of flagellar motility genes

NZ_CP084530.1 - Region 9 - cyclic-lactone-autoinducer

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Location: 2,638,869 - 2,659,399 nt. (total: 20,531 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

TFBS Finder

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Translocases: transport

LDO05_RS12465: MMPL domain-containing transport protein

smcogs: SMCOG1035: MMPL domain-containing transport protein

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000779.3	0.35	saccharide	lipopolysaccharide	Aeromonas piscicola
BGC0000679.5	0.24	terpene	diazepinomicin	Micromonospora sp. M42
BGC0001330.5	0.23	NRPS, PKS	BE-43547A1, BE-43547A2, BE-43547B1, BE-43547B2, BE-43547B3, BE-43547C1, BE-43547C2	Micromonospora sp. RV43
BGC0002381.3	0.23	PKS, other (other)	tambjamine BE-18591	Streptomyces albus subsp. albus
BGC0000982.5	0.23	NRPS, PKS	cystothiazole A	Cystobacter fuscus
BGC0001848.4	0.22	other (other)	diazaquinomycin H, diazaquinomycin J	Micromonospora sp. B006
BGC0000203.3	0.21	PKS	BE-7585A	Amycolatopsis orientalis subsp. vinearia
BGC0000780.3	0.19	saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000965.5	0.18	PKS	C-1027	Streptomyces globisporus
BGC0001397.5	0.18	NRPS, PKS	lidamycin	Streptomyces globisporus C-1027

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000779.3	0.35	saccharide	lipopolysaccharide	Aeromonas piscicola
BGC0000679.5	0.24	terpene	diazepinomicin	Micromonospora sp. M42
BGC0001330.5	0.23	NRPS, PKS	BE-43547A1, BE-43547A2, BE-43547B1, BE-43547B2, BE-43547B3, BE-43547C1, BE-43547C2	Micromonospora sp. RV43
BGC0002381.3	0.23	PKS, other (other)	tambjamine BE-18591	Streptomyces albus subsp. albus
BGC0000982.5	0.23	NRPS, PKS	cystothiazole A	Cystobacter fuscus
BGC0001848.4	0.22	other (other)	diazaquinomycin H, diazaquinomycin J	Micromonospora sp. B006
BGC0000203.3	0.21	PKS	BE-7585A	Amycolatopsis orientalis subsp. vinearia
BGC0000780.3	0.19	saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000965.5	0.18	PKS	C-1027	Streptomyces globisporus
BGC0001397.5	0.18	NRPS, PKS	lidamycin	Streptomyces globisporus C-1027

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Transcription Factor Binding Sites

Binding sites found:

ToxT

Description: Regulator of MSHA biosynthesis
Species: Vibrio cholerae O395
Score: 18.31 out of 18.57

Confidence: strong

CodY

Description: Regulator of stationary phase and virulence in Gram-positive bacteria
Species: Bacillus, Lactococcus & Streptococcus sp.
Score: 22.21 out of 27.78

Confidence: medium

IolR

Description: Regulator of the inositol catabolism
Species: Caulobacter crescentus CB15
Score: 19.51 out of 23.79

Confidence: medium

LexA variant 2

Description: Repressor of DNA damage response
Species: Bacillus subtilis subsp. subtilis str. 168
Score: 22.90 out of 24.78

Confidence: strong

Additional weak hits (1):

ColR

Description: Phenol-responsive regulator
Species: Pseudomonas putida KT2440
Score: 21.71 out of 30.25

Confidence: weak

TFBS Finder

TFBS definitions

Regulator	Description
CodY	Regulator of stationary phase and virulence in Gram-positive bacteria
IolR	Regulator of the inositol catabolism
LexA variant 2	Repressor of DNA damage response
ToxT	Regulator of MSHA biosynthesis

NZ_CP084530.1 - Region 10 - terpene

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Location: 3,549,555 - 3,570,478 nt. (total: 20,924 nt) Show pHMM detection rules used

terpene: (PT_phytoene_like or phytoene_synt or Lycopene_cycl or Lycopene_cycl_fung or T1TS or T1TS_KS or T2TS or TS_UbiA or TS_Pyr4)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

TFBS Finder

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: dehydrogenase

LDO05_RS16845: dehydrogenase

smcogs: SMCOG1222: dehydrogenase

LDO05_RS16870: dehydrogenase

smcogs: SMCOG1222: dehydrogenase

LDO05_RS16875: dehydrogenase

smcogs: SMCOG1222: dehydrogenase

Ligases: synthase

LDO05_RS16850: polyprenol-monophosphomannose synthase ppm1

smcogs: SMCOG1123: polyprenol-monophosphomannose synthase ppm1

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000645.3	0.65	terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000656.5	0.58	terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000647.3	0.58	terpene	carotenoid	Rhodobacter sphaeroides
BGC0000664.5	0.50	terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001456.3	0.49	terpene	isorenieratene	Streptomyces argillaceus
BGC0000640.3	0.45	terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000642.3	0.44	terpene	carotenoid	Enterobacteriaceae bacterium DC413
BGC0000633.3	0.43	terpene	carotenoid	Streptomyces avermitilis
BGC0001227.3	0.43	terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000635.3	0.42	terpene	carotenoid	Paracoccus sp. N81106

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000645.3	0.65	terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000656.5	0.58	terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000647.3	0.58	terpene	carotenoid	Rhodobacter sphaeroides
BGC0000664.5	0.50	terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001456.3	0.49	terpene	isorenieratene	Streptomyces argillaceus
BGC0000640.3	0.45	terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000642.3	0.44	terpene	carotenoid	Enterobacteriaceae bacterium DC413
BGC0000633.3	0.43	terpene	carotenoid	Streptomyces avermitilis
BGC0001227.3	0.43	terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000635.3	0.42	terpene	carotenoid	Paracoccus sp. N81106

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Subclass	Product name	Chain length	Initial cyclisations	Functional groups
triterpene		squalene	C30	acyclic	none
triterpene		PSPP	C30	acyclic	PP
triterpene	C30 carotenoid	diapophytoene	C30	acyclic	none
tetraterpene	C40 carotenoid	phytoene	C40	acyclic	none
triterpene		hydroxysqualene	C30	acyclic	OH

Genes with terpene domains:

LDO05_RS16865: PT_phytoene_like

Domain 1 (6 - 279): Prenyltransferase; Phytoene synthase like

Subtype: unknown

Reactions:: FPP → squalene; FPP → PSPP; FPP → diapophytoene; GGPP → phytoene; PSPP → hydroxysqualene

Transcription Factor Binding Sites

Binding sites found:

RutR

Description: Regulator of the pyrimidine and purine metabolism
Species: Escherichia coli str. K-12 substr. MG1655
Score: 22.69 out of 26.85

Confidence: medium

Additional weak hits (6):

SypG

Description: Regulator of biofilm formation and host colonization
Species: Vibrio fischeri ES114
Score: 22.62 out of 29.25

Confidence: weak

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 18.73 out of 28.14

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 20.81 out of 26.06

Confidence: weak

ArcA

Description: Repressor of carbon oxidation
Species: Escherichia coli str. K-12 substr. MG1655
Score: 17.36 out of 21.55

Confidence: weak

ArgR

Description: Regulator of arginine biosynthesis genes
Species: Streptomyces coelicolor
Score: 17.50 out of 20.01

Confidence: weak

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 19.20 out of 26.06

Confidence: weak

Terpene

TFBS Finder

Glossary

Acronym	Full name
FPP	Farnesyl diphosphate
GGPP	Geranylgeranyl diphosphate
PP	Diphosphate
PSPP	Presqualene diphosphate

TFBS definitions

Regulator	Description
RutR	Regulator of the pyrimidine and purine metabolism