GCF_023238445.1 - 10 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP096658.1 (Halorussus gelatinilyticus)

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 1	RiPP-like	114,957	126,777
Region 2	terpene	423,327	443,668
Region 3	terpene-precursor	1,411,228	1,432,070
Region 4	azole-containing-RiPP	1,561,463	1,584,795
Region 5	NI-siderophore	1,752,324	1,781,010
Region 6	terpene	1,941,096	1,961,998
Region 7	terpene	2,365,042	2,385,995
Region 8	lanthipeptide-class-ii	3,175,523	3,198,759	Medium	archalan α	ribosomal:RiPP
Region 9	terpene-precursor	3,200,516	3,221,577
Region 10	terpene	3,295,237	3,316,322

NZ_CP096658.1 - Region 1 - RiPP-like

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Location: 114,957 - 126,777 nt. (total: 11,821 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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Gene overview

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Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

No tailoring functions detected.

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002584.2	0.43	ribosomal	azolemycin B, azolemycin A, azolemycin D, azolemycin C	Streptomyces sp. FXJ1.264
BGC0001174.4	0.37	ribosomal	corynazolicin	Corynebacterium urealyticum DSM 7111
BGC0001753.3	0.28	ribosomal	radamycin, globimycin	Streptomyces globisporus subsp. globisporus
BGC0002652.2	0.26	other (other), saccharide	cytosaminomycin F, cytosaminomycin G, streptcytosine P, plicacetin, 40551-F, 12F-plicacetin, streptcytosine D, streptcytosine E	Streptomyces sp. SHP22-7
BGC0000953.5	0.23	saccharide	amicetin	Streptomyces vinaceusdrappus
BGC0002288.2	0.22	NRPS	ashimide A, ashimide B	Streptomyces sp. NA03103
BGC0001379.5	0.22	NRPS	BD-12	Streptomyces luteocolor
BGC0000376.5	0.20	NRPS	JBIR-34, JBIR-35	Streptomyces sp. Sp080513GE-23
BGC0001368.5	0.20	NRPS	JBIR-126	Streptomyces sp. NRRL F-4474

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002584.2	0.43	ribosomal	azolemycin B, azolemycin A, azolemycin D, azolemycin C	Streptomyces sp. FXJ1.264
BGC0001174.4	0.37	ribosomal	corynazolicin	Corynebacterium urealyticum DSM 7111
BGC0001753.3	0.28	ribosomal	radamycin, globimycin	Streptomyces globisporus subsp. globisporus
BGC0002652.2	0.26	other (other), saccharide	cytosaminomycin F, cytosaminomycin G, streptcytosine P, plicacetin, 40551-F, 12F-plicacetin, streptcytosine D, streptcytosine E	Streptomyces sp. SHP22-7
BGC0000953.5	0.23	saccharide	amicetin	Streptomyces vinaceusdrappus
BGC0002288.2	0.22	NRPS	ashimide A, ashimide B	Streptomyces sp. NA03103
BGC0001379.5	0.22	NRPS	BD-12	Streptomyces luteocolor
BGC0000376.5	0.20	NRPS	JBIR-34, JBIR-35	Streptomyces sp. Sp080513GE-23
BGC0001368.5	0.20	NRPS	JBIR-126	Streptomyces sp. NRRL F-4474

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

NZ_CP096658.1 - Region 2 - terpene

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Location: 423,327 - 443,668 nt. (total: 20,342 nt) Show pHMM detection rules used

terpene: (PT_phytoene_like or phytoene_synt or Lycopene_cycl or Lycopene_cycl_fung or T1TS or T1TS_KS or T2TS or TS_UbiA or TS_Pyr4)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Translocases: permease

M0R88_RS02265: phenylalanine-specific permease

smcogs: SMCOG1038: phenylalanine-specific permease

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001962.3	0.35	PKS	hierridin B, hierridin C	Cyanobium sp. LEGE 06113
BGC0000514.5	0.29	ribosomal	gallidermin	Staphylococcus gallinarum
BGC0001778.5	0.29	other (other)	showdomycin	Streptomyces showdoensis
BGC0000559.4	0.27	ribosomal	subtilin	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0002668.2	0.26	ribosomal	cesin A	Clostridium estertheticum
BGC0001594.3	0.26	other (other)	fischerindole L	Fischerella muscicola UTEX 1829
BGC0001126.4	0.25	other (other), terpene	12-epi-hapalindole J isonitrile, ambiguine A isonitrile, ambiguine B isonitrile, ambiguine C isonitrile, ambiguine D isonitrile, ambiguine E isonitrile, ambiguine K isonitrile, ambiguine L isonitrile, ambiguine I isonitrile, ambiguine J isonitrile	Fischerella ambigua UTEX 1903
BGC0001501.5	0.25	other (other)	ambiguine P	Fischerella sp. TAU
BGC0001612.3	0.25	other (other)	ambiguine H isonitrile	Fischerella ambigua UTEX 1903
BGC0001283.3	0.23	PKS	Bisenarsan	Streptomyces lividans 1326

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001962.3	0.35	PKS	hierridin B, hierridin C	Cyanobium sp. LEGE 06113
BGC0000514.5	0.29	ribosomal	gallidermin	Staphylococcus gallinarum
BGC0001778.5	0.29	other (other)	showdomycin	Streptomyces showdoensis
BGC0000559.4	0.27	ribosomal	subtilin	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0002668.2	0.26	ribosomal	cesin A	Clostridium estertheticum
BGC0001594.3	0.26	other (other)	fischerindole L	Fischerella muscicola UTEX 1829
BGC0001126.4	0.25	other (other), terpene	12-epi-hapalindole J isonitrile, ambiguine A isonitrile, ambiguine B isonitrile, ambiguine C isonitrile, ambiguine D isonitrile, ambiguine E isonitrile, ambiguine K isonitrile, ambiguine L isonitrile, ambiguine I isonitrile, ambiguine J isonitrile	Fischerella ambigua UTEX 1903
BGC0001501.5	0.25	other (other)	ambiguine P	Fischerella sp. TAU
BGC0001612.3	0.25	other (other)	ambiguine H isonitrile	Fischerella ambigua UTEX 1903
BGC0001283.3	0.23	PKS	Bisenarsan	Streptomyces lividans 1326

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Subclass	Product name	Chain length	Initial cyclisations	Functional groups
tetraterpene	C40 carotenoid		C40	unknown	unknown

Genes with terpene domains:

M0R88_RS02245: Lycopene_cycl

Domain 1 (12 - 91): Lycopene cyclase

Reactions:: C40_carotenoid → C40_carotenoid

Terpene

Glossary

No acronyms to display

NZ_CP096658.1 - Region 3 - terpene-precursor

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Location: 1,411,228 - 1,432,070 nt. (total: 20,843 nt) Show pHMM detection rules used

terpene-precursor: (PT_FPPS_like and not PT_HPP)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Transferases: methyltransferase

M0R88_RS07415: methyltransferase

smcogs: SMCOG1089: methyltransferase

Hydrolases: protease

M0R88_RS07385: alkaline serine protease, subtilase family

smcogs: SMCOG1075: alkaline serine protease, subtilase family

Ligases: synthetase

M0R88_RS07370: Polyprenyl synthetase

smcogs: SMCOG1182: Polyprenyl synthetase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002162.3	0.50	terpene	sesterfisherol, sesterfisheric acid, compound 6, compound 7a, compound 5, compound 8	Aspergillus fischeri NRRL 181
BGC0002736.2	0.49	terpene	preaspterpenacid I	Aspergillus terreus NIH2624
BGC0002610.3	0.49	terpene	stellatic acid	Aspergillus stellatus
BGC0000244.4	0.41	PKS	nonactin, monactin, dinactin, trinactin, tetranactin	Streptomyces griseus subsp. griseus
BGC0001528.4	0.40	terpene	betaestacin I, betaestacin II	Phoma betae
BGC0002219.2	0.39	terpene	(-)-(R)-nephthenol	Stereum hirsutum FP-91666 SS1
BGC0000646.5	0.38	terpene	β-carotein	uncultured bacterium
BGC0000641.3	0.37	terpene	carotenoid	Enterobacteriaceae bacterium DC416
BGC0000639.3	0.37	terpene	carotenoid	Enterobacteriaceae bacterium DC260
BGC0000642.3	0.37	terpene	carotenoid	Enterobacteriaceae bacterium DC413

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002162.3	0.50	terpene	sesterfisherol, sesterfisheric acid, compound 6, compound 7a, compound 5, compound 8	Aspergillus fischeri NRRL 181
BGC0002736.2	0.49	terpene	preaspterpenacid I	Aspergillus terreus NIH2624
BGC0002610.3	0.49	terpene	stellatic acid	Aspergillus stellatus
BGC0000244.4	0.41	PKS	nonactin, monactin, dinactin, trinactin, tetranactin	Streptomyces griseus subsp. griseus
BGC0001528.4	0.40	terpene	betaestacin I, betaestacin II	Phoma betae
BGC0002219.2	0.39	terpene	(-)-(R)-nephthenol	Stereum hirsutum FP-91666 SS1
BGC0000646.5	0.38	terpene	β-carotein	uncultured bacterium
BGC0000641.3	0.37	terpene	carotenoid	Enterobacteriaceae bacterium DC416
BGC0000639.3	0.37	terpene	carotenoid	Enterobacteriaceae bacterium DC260
BGC0000642.3	0.37	terpene	carotenoid	Enterobacteriaceae bacterium DC413

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Product name	Chain length	Initial cyclisations	Functional groups
sesquiterpene precursor	FPP	C15	acyclic	PP
diterpene precursor	GGPP	C20	acyclic	PP
sesterterpene precursor	GFPP	C25	acyclic	PP
triterpene precursor	HPP	C30	acyclic	PP

Genes with terpene domains:

M0R88_RS07370: PT_FPPS_like

Domain 1 (28 - 238): Prenyltransferase; Farnesyl diphosphate synthase like

Subtype: unknown

Reactions:: IPP, DMAPP → FPP; IPP, DMAPP → GGPP; IPP, DMAPP → GFPP; IPP, DMAPP → HPP

Terpene

Glossary

Acronym	Full name
DMAPP	Dimethylallyl diphosphate
FPP	Farnesyl diphosphate
GFPP	Geranylfarnesyl diphosphate
GGPP	Geranylgeranyl diphosphate
HPP	Hexaprenyl diphosphate
IPP	Isopentenyl diphosphate
PP	Diphosphate

NZ_CP096658.1 - Region 4 - azole-containing-RiPP

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Location: 1,561,463 - 1,584,795 nt. (total: 23,333 nt) Show pHMM detection rules used

azole-containing-RiPP: ((YcaO or TIGR03604) and (((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or (PF06968 or PF04055 or PF07366)) or (goadsporin_like or PF00881 or TIGR03605)) or TIGR03882 or TIGR03603 or thiostrepton or TIGR03602)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Azole RiPPs

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: dehydrogenase

M0R88_RS08105: short-chain dehydrogenase/reductase SDR

smcogs: SMCOG1001: short-chain dehydrogenase/reductase SDR

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001174.4	0.50	ribosomal	corynazolicin	Corynebacterium urealyticum DSM 7111
BGC0002013.4	0.47	ribosomal	curacozole	Streptomyces curacoi
BGC0000568.5	0.47	ribosomal	microcin B17	Escherichia coli
BGC0001173.5	0.45	ribosomal	plantazolicin	Bacillus pumilus ATCC 7061
BGC0000569.5	0.45	ribosomal	plantazolicin	Bacillus velezensis FZB42
BGC0001170.5	0.42	ribosomal	clostridiolysin S	Clostridium sporogenes ATCC 15579
BGC0000564.5	0.42	ribosomal	clostridiolysin S	Clostridium botulinum A str. ATCC 3502
BGC0001618.3	0.40	ribosomal	hyicin 3682	Staphylococcus hyicus
BGC0000477.3	0.39	ribosomal	patellin 2, patellin 3	uncultured Prochloron sp. 06037A
BGC0002111.3	0.39	ribosomal	andalusicin A, andalusicin B	Bacillus thuringiensis serovar andalousiensis NRRL B-23139

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001174.4	0.50	ribosomal	corynazolicin	Corynebacterium urealyticum DSM 7111
BGC0002013.4	0.47	ribosomal	curacozole	Streptomyces curacoi
BGC0000568.5	0.47	ribosomal	microcin B17	Escherichia coli
BGC0001173.5	0.45	ribosomal	plantazolicin	Bacillus pumilus ATCC 7061
BGC0000569.5	0.45	ribosomal	plantazolicin	Bacillus velezensis FZB42
BGC0001170.5	0.42	ribosomal	clostridiolysin S	Clostridium sporogenes ATCC 15579
BGC0000564.5	0.42	ribosomal	clostridiolysin S	Clostridium botulinum A str. ATCC 3502
BGC0001618.3	0.40	ribosomal	hyicin 3682	Staphylococcus hyicus
BGC0000477.3	0.39	ribosomal	patellin 2, patellin 3	uncultured Prochloron sp. 06037A
BGC0002111.3	0.39	ribosomal	andalusicin A, andalusicin B	Bacillus thuringiensis serovar andalousiensis NRRL B-23139

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

(Thi)azol(in)e containing peptide predictions

No core peptides found.

Azole RiPPs

Core peptide predictions

No core peptides found.

NZ_CP096658.1 - Region 5 - NI-siderophore

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Location: 1,752,324 - 1,781,010 nt. (total: 28,687 nt) Show pHMM detection rules used

NI-siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: oxidoreductase reductase

M0R88_RS09140: aldo/keto reductase family oxidoreductase

smcogs: SMCOG1039: aldo/keto reductase family oxidoreductase

M0R88_RS09150: alkyl hydroperoxide reductase subunit

smcogs: SMCOG1176: alkyl hydroperoxide reductase subunit

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002073.3	0.51	NRPS	dehydroxynocardamine	Corynebacterium propinquum
BGC0000584.5	0.47	ribosomal	colicin V	Escherichia coli
BGC0000939.5	0.44	other (other)	aerobactin	Grimontia hollisae
BGC0002682.2	0.44	other (other)	aerobactin	Vibrio mimicus
BGC0000295.5	0.44	NRPS	acinetoferrin	Acinetobacter haemolyticus
BGC0001870.3	0.43	other (other)	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0002306.2	0.42	ribosomal	freyrasin	Paenibacillus polymyxa ATCC 842
BGC0000551.5	0.42	ribosomal	SapB	Streptomyces coelicolor A3(2)
BGC0001555.4	0.42	ribosomal	colicin V	Escherichia coli chi7122
BGC0000558.5	0.42	ribosomal	sublancin 168	Bacillus subtilis subsp. subtilis str. 168

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002073.3	0.51	NRPS	dehydroxynocardamine	Corynebacterium propinquum
BGC0000584.5	0.47	ribosomal	colicin V	Escherichia coli
BGC0000939.5	0.44	other (other)	aerobactin	Grimontia hollisae
BGC0002682.2	0.44	other (other)	aerobactin	Vibrio mimicus
BGC0000295.5	0.44	NRPS	acinetoferrin	Acinetobacter haemolyticus
BGC0001870.3	0.43	other (other)	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0002306.2	0.42	ribosomal	freyrasin	Paenibacillus polymyxa ATCC 842
BGC0000551.5	0.42	ribosomal	SapB	Streptomyces coelicolor A3(2)
BGC0001555.4	0.42	ribosomal	colicin V	Escherichia coli chi7122
BGC0000558.5	0.42	ribosomal	sublancin 168	Bacillus subtilis subsp. subtilis str. 168

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

NZ_CP096658.1 - Region 6 - terpene

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Location: 1,941,096 - 1,961,998 nt. (total: 20,903 nt) Show pHMM detection rules used

terpene: (PT_phytoene_like or phytoene_synt or Lycopene_cycl or Lycopene_cycl_fung or T1TS or T1TS_KS or T2TS or TS_UbiA or TS_Pyr4)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: dehydrogenase reductase

M0R88_RS10065: alcohol dehydrogenase

smcogs: SMCOG1040: alcohol dehydrogenase

M0R88_RS10145: alkyl hydroperoxide reductase/ Thiol specific

smcogs: SMCOG1196: alkyl hydroperoxide reductase/ Thiol specific

Transferases: glycosyltransferase methyltransferase

M0R88_RS10025: methyltransferase

smcogs: SMCOG1089: methyltransferase

M0R88_RS10055: glycosyl transferase group 1

smcogs: SMCOG1045: glycosyl transferase group 1

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002354.4	0.37	other (other)	huimycin	Kutzneria albida DSM 43870
BGC0001387.5	0.32	other (other)	nucleocidin	Streptomyces calvus
BGC0001875.4	0.24	PKS	nargenicin A1	Nocardia arthritidis AUSMDU00012717 Unclassified.

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002354.4	0.37	other (other)	huimycin	Kutzneria albida DSM 43870
BGC0001387.5	0.32	other (other)	nucleocidin	Streptomyces calvus
BGC0001875.4	0.24	PKS	nargenicin A1	Nocardia arthritidis AUSMDU00012717 Unclassified.

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Subclass	Product name	Chain length	Initial cyclisations	Functional groups
tetraterpene	C40 carotenoid		C40	unknown	unknown

Genes with terpene domains:

M0R88_RS10075: Lycopene_cycl + Lycopene_cycl

Domain 1 (6 - 97): Lycopene cyclase

Reactions:: C40_carotenoid → C40_carotenoid

Domain 2 (156 - 244): Lycopene cyclase

Reactions:: C40_carotenoid → C40_carotenoid

Terpene

Glossary

No acronyms to display

NZ_CP096658.1 - Region 7 - terpene

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Location: 2,365,042 - 2,385,995 nt. (total: 20,954 nt) Show pHMM detection rules used

terpene: (PT_phytoene_like or phytoene_synt or Lycopene_cycl or Lycopene_cycl_fung or T1TS or T1TS_KS or T2TS or TS_UbiA or TS_Pyr4)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Hydrolases: deacetylase

M0R88_RS12235: acetylornithine deacetylase

smcogs: SMCOG1247: acetylornithine deacetylase

Lyases: decarboxylase lyase

M0R88_RS12220: argininosuccinate lyase/adenylosuccinate lyase

smcogs: SMCOG1063: argininosuccinate lyase/adenylosuccinate lyase

M0R88_RS12245: diaminopimelate decarboxylase

smcogs: SMCOG1264: diaminopimelate decarboxylase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000645.3	0.42	terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0002645.3	0.41	other (other)	fluopsin C	Pseudomonas aeruginosa PAO1
BGC0000664.5	0.40	terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000633.3	0.40	terpene	carotenoid	Streptomyces avermitilis
BGC0001227.3	0.39	terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0001456.3	0.39	terpene	isorenieratene	Streptomyces argillaceus
BGC0001778.5	0.39	other (other)	showdomycin	Streptomyces showdoensis
BGC0000648.3	0.37	terpene	carotenoid	Myxococcus xanthus
BGC0000663.5	0.36	terpene	hopene	Streptomyces coelicolor A3(2)
BGC0000494.5	0.33	ribosomal	uberolysin	Streptococcus uberis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000645.3	0.42	terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0002645.3	0.41	other (other)	fluopsin C	Pseudomonas aeruginosa PAO1
BGC0000664.5	0.40	terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000633.3	0.40	terpene	carotenoid	Streptomyces avermitilis
BGC0001227.3	0.39	terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0001456.3	0.39	terpene	isorenieratene	Streptomyces argillaceus
BGC0001778.5	0.39	other (other)	showdomycin	Streptomyces showdoensis
BGC0000648.3	0.37	terpene	carotenoid	Myxococcus xanthus
BGC0000663.5	0.36	terpene	hopene	Streptomyces coelicolor A3(2)
BGC0000494.5	0.33	ribosomal	uberolysin	Streptococcus uberis

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Subclass	Product name	Chain length	Initial cyclisations	Functional groups
triterpene	C30 carotenoid	diapophytoene	C30	acyclic	none
triterpene		squalene	C30	acyclic	none
triterpene		PSPP	C30	acyclic	PP
tetraterpene	C40 carotenoid	phytoene	C40	acyclic	none
triterpene		hydroxysqualene	C30	acyclic	OH

Genes with terpene domains:

M0R88_RS12210: PT_phytoene_like

Domain 1 (8 - 282): Prenyltransferase; Phytoene synthase like

Subtype: unknown

Reactions:: FPP → diapophytoene; FPP → squalene; FPP → PSPP; GGPP → phytoene; PSPP → hydroxysqualene

Terpene

Glossary

Acronym	Full name
FPP	Farnesyl diphosphate
GGPP	Geranylgeranyl diphosphate
PP	Diphosphate
PSPP	Presqualene diphosphate

NZ_CP096658.1 - Region 8 - lanthipeptide-class-ii

Download region GenBank file

Download region SVG

Location: 3,175,523 - 3,198,759 nt. (total: 23,237 nt) Show pHMM detection rules used

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Lyases: cyclase

M0R88_RS16215: lanthionine synthetase C family protein

smcogs: SMCOG1070: lanthionine synthetase C family protein

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002703.2	0.61	ribosomal	archalan α	Halorussus salinus
BGC0000525.5	0.50	ribosomal	lichenicidin VK21 A1, lichenicidin VK21 A2	Bacillus licheniformis
BGC0002704.2	0.47	ribosomal	archalan β	Halorussus salinus
BGC0000554.4	0.42	ribosomal	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000504.5	0.42	ribosomal	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0002698.2	0.39	ribosomal	phaeornamide	Pseudophaeobacter arcticus DSM 23566
BGC0002699.2	0.38	ribosomal	nostolysamide A, nostolysamide B	Nostoc punctiforme PCC 73102
BGC0002330.2	0.33	ribosomal	landornamide A	Kamptonema sp. PCC 6506
BGC0000881.3	0.27	other (other)	toyocamycin	Streptomyces ahygroscopicus subsp. wuzhouensis
BGC0001808.5	0.27	other (other)	toyocamycin	Streptomyces diastatochromogenes

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002703.2	0.61	ribosomal	archalan α	Halorussus salinus
BGC0000525.5	0.50	ribosomal	lichenicidin VK21 A1, lichenicidin VK21 A2	Bacillus licheniformis
BGC0002704.2	0.47	ribosomal	archalan β	Halorussus salinus
BGC0000554.4	0.42	ribosomal	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000504.5	0.42	ribosomal	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0002698.2	0.39	ribosomal	phaeornamide	Pseudophaeobacter arcticus DSM 23566
BGC0002699.2	0.38	ribosomal	nostolysamide A, nostolysamide B	Nostoc punctiforme PCC 73102
BGC0002330.2	0.33	ribosomal	landornamide A	Kamptonema sp. PCC 6506
BGC0000881.3	0.27	other (other)	toyocamycin	Streptomyces ahygroscopicus subsp. wuzhouensis
BGC0001808.5	0.27	other (other)	toyocamycin	Streptomyces diastatochromogenes

Similar known clusters from MIBiG 4.0

Similar subclusters

No significant matches found.

Lanthipeptide predictions

Lanthipeptide(s) for M0R88_RS16215

M0R88_RS16185

Leader:

MADNRVVQGRMVTPEALAELIEGEDVMDA

Core:

EAISETDRECPDCGGDVLEVGYMPSVTEFVTGWKCQDCDWADTDRD

Core with dehydrations:

EAIDhaEDhbDRECysPDCysGGDVLEVGYMPDhaVDhbEFVDhbGWKCysQDCysDWADDhbDRD

antiSMASH-DB 4.0 matches for M0R88_RS16185

100.0%

NZ_CP096658.1and 1 other:

NZ_ML974127.1 Lanthipeptides: EPL00_RS07765_lanthipeptide

Lanthipeptides: M0R88_RS16185_lanthipeptide

1

EAISETDRECPDCGGDVLEVGYMPSVTEFVTGWKCQDCDWADTDRD

46

EAISETDRECPDCGGDVLEVGYMPSVTEFVTGWKCQDCDWADTDRD

1

EAISETDRECPDCGGDVLEVGYMPSVTEFVTGWKCQDCDWADTDRD

46

84.8%

NZ_CP119804.1:

Lanthipeptides: P2T57_RS03940_lanthipeptide

1

EAISETDRECPDCGGDVLEVGYMPSVTEFVTGWKCQDCDWADTDRD

46

E+I +TDRECPDCG DVLEVGYMPSVTEFVTGWKCQ+CDW+DTDR+

1

ESIEDTDRECPDCGEDVLEVGYMPSVTEFVTGWKCQECDWSDTDRE

46

78.3%

NZ_CP096019.1:

Lanthipeptides: MW046_RS07480_lanthipeptide

1

EAISETDRECPDCGGDVLEVGYMPSVTEFVTGWKCQDCDWADTDRD

46

E+IS+TDRECPDCGG V+ VGYMPSV EFVTG+KCQDCDW TDR+

1

ESISDTDRECPDCGGPVVSVGYMPSVMEFVTGYKCQDCDWKATDRE

46

with 2 more sequence matches

15.2%

NZ_ML974127.1:

Lanthipeptides: EPL00_RS07380_lanthipeptide

9

ECPDCGGDVLEV

20

+CPDCGG + V

19

KCPDCGGALTFV

30

13.0%

NZ_CP096019.1:

Lanthipeptides: allorf_1444717_1444914_lanthipeptide

10

CPDCGGDVLE

19

CP+CGG +E

15

CPECGGYAIE

24

MIBiG 4.0 matches for M0R88_RS16185

8.7%

BGC0000582.4 (ADR72962.1):

Linaridin: cypemycin

24

PSVTEFV

30

P+V +FV

6

PTVAQFV

12

allorf_3178073_3178228

Leader:

MELSGARTQLSPAMSGFETYTCENCGDEFEAHESANA

Core:

AEESYCSPKCQTAA

Core with dehydrations:

AEEDhaYCysDhaPKCysQDhbAA

antiSMASH-DB 4.0 matches for allorf_3178073_3178228

100.0%

NZ_CP096658.1:

Lanthipeptides: allorf_3178073_3178228_lanthipeptide

1

AEESYCSPKCQTAA

14

AEESYCSPKCQTAA

1

AEESYCSPKCQTAA

14

85.7%

NZ_ML974127.1:

Lanthipeptides: allorf_1546009_1546125_lanthipeptide

2

EESYCSPKCQTAA

14

+ESYCSPKCQTAA

1

DESYCSPKCQTAA

13

28.9%

NZ_CP119804.1:

Lanthipeptides: allorf_0774884_0775030_lanthipeptide

1

AEESYCSPKCQTAA

14

AE YCSPKCQT A

25

AENGYCSPKCQTTA

38

with 24 more sequence matches

Only the first 10 are displayed here.

23.3%

NZ_CP086322.1and 1 other:

NZ_NDXL01000003.1 Lanthipeptides: B7024_RS31125_lanthipeptide

Lanthipeptides: K9S39_RS23570_lanthipeptide

4

SYCSPKCQTAA

14

S C+P C TAA

5

SLCTPGCVTAA

15

21.9%

NC_014479.1and 9 others:

NZ_CP026362.1 Lanthipeptides: BV11031_RS00400_lanthipeptideNZ_CP033052.1 Lanthipeptides: D9779_RS17315_lanthipeptideNZ_CP051464.1 Lanthipeptides: HC660_RS17030_lanthipeptideNZ_JALAKK010000002.1 Lanthipeptides: MOB09_RS02800_lanthipeptideNZ_JALAKO010000014.1 Lanthipeptides: MOB26_RS08535_lanthipeptideNZ_JALAOG010000003.1 Lanthipeptides: MOC96_RS02500_lanthipeptideNZ_JALAPG010000043.1 Lanthipeptides: MOC70_RS16815_lanthipeptideNZ_JALAQI010000009.1 Lanthipeptides: MOD13_RS06065_lanthipeptideNZ_NXEM01000027.1 Lanthipeptides: CPT06_RS15285_lanthipeptide

Lanthipeptides: BSUW23_RS16845_lanthipeptide

3

ESYCSPKCQTAA

14

ES C+P C T A

4

ESLCTPGCVTGA

15

20.8%

NZ_CP007699.2and 8 others:

NZ_CP048882.1 Lanthipeptides: G4Z16_RS06545_lanthipeptideNZ_CP048882.1 Lanthipeptides: G4Z16_RS06545_lanthipeptideNZ_FMHI01000015.1 Lanthipeptides: H180DRAFT_RS21560_lanthipeptideNZ_JADDUE010000020.1 Lanthipeptides: INP57_RS28495_lanthipeptideNZ_JAMTCQ010000009.1 Lanthipeptides: LY41_RS11610_lanthipeptideNZ_KB905819.1 Lanthipeptides: F603_RS34750_lanthipeptideNZ_LIVZ01000011.1 Lanthipeptides: AMK31_RS29125_lanthipeptideNZ_LIXJ01000007.1 Lanthipeptides: AMK22_RS13160_lanthipeptide

Lanthipeptides: T261_RS08380_lanthipeptide

4

SYCSPKCQT

12

SYC+P C +

5

SYCTPGCTS

13

20.7%

NZ_CP101621.1:

Lanthipeptides: NN913_RS16125_lanthipeptide

1

AEESYCSPKCQTAA

14

+S C+P C T A

2

VSKSLCTPGCITGA

15

18.8%

NC_016047.1and 2 others:

NZ_KZ848487.1 Lanthipeptides: DSL71_RS15965_lanthipeptideNZ_MUXL01000003.1 Lanthipeptides: B0W20_RS12275_lanthipeptide

Lanthipeptides: GYO_RS39160_lanthipeptide

3

ESYCSPKCQTA

13

ES C+P C T

4

ESVCTPGCVTG

14

18.8%

NZ_CP021903.1and 20 others:

NZ_CP023409.1 Lanthipeptides: Bateq7PJ16_RS18530_lanthipeptideNZ_CP026036.1 Lanthipeptides: C2H93_RS15000_lanthipeptideNZ_CP028218.1 Lanthipeptides: C7M30_RS14555_lanthipeptideNZ_CP035167.1 Lanthipeptides: EQJ08_RS17140_lanthipeptideNZ_CP035226.1 Lanthipeptides: EQW70_RS18175_lanthipeptideNZ_CP045006.1 Lanthipeptides: F9B13_RS03875_lanthipeptideNZ_CP076083.1 Lanthipeptides: KFF76_RS16710_lanthipeptideNZ_CP079759.1 Lanthipeptides: KXZ66_RS17780_lanthipeptideNZ_CP080508.1 Lanthipeptides: K0V03_RS06525_lanthipeptideNZ_CP089148.1 Lanthipeptides: LRO88_RS19055_lanthipeptideNZ_JALAUA010000003.1 Lanthipeptides: MOD32_RS04985_lanthipeptideNZ_JALAVX010000009.1 Lanthipeptides: MOE40_RS09385_lanthipeptideNZ_JAMYDW010000007.1 Lanthipeptides: NHM07_RS16180_lanthipeptideNZ_JAQOXM010000001.1 Lanthipeptides: PO770_RS03875_lanthipeptideNZ_NJRD01000003.1 Lanthipeptides: CE053_RS07200_lanthipeptideNZ_NJRE01000008.1 Lanthipeptides: CE047_RS18435_lanthipeptideNZ_SORJ01000001.1 Lanthipeptides: BJ795_RS01490_lanthipeptideNZ_VFNF01000001.1 Lanthipeptides: FB592_RS01525_lanthipeptideNZ_VIOH01000001.1 Lanthipeptides: FLN47_RS03850_lanthipeptideNZ_VLJL01000012.1 Lanthipeptides: L604_RS09425_lanthipeptide

Lanthipeptides: CD007_RS17065_lanthipeptide

3

ESYCSPKCQTAA

14

ES C+P C T

4

ESLCTPGCVTGV

15

18.8%

NZ_CP025079.1and 3 others:

NZ_CP047644.1 Lanthipeptides: GNE05_RS17275_lanthipeptideNZ_CP099859.1 Lanthipeptides: NIZ95_RS16280_lanthipeptideNZ_CP101621.1 Lanthipeptides: NN913_RS16115_lanthipeptide

Lanthipeptides: BVQ_RS17705_lanthipeptide

3

ESYCSPKCQTAA

14

ES C+P C T

4

ESVCTPGCVTGV

15

18.8%

NZ_CP059471.1and 3 others:

NZ_FNZW01000001.1 Lanthipeptides: BMZ61_RS02110_lanthipeptideNZ_FOYC01000001.1 Lanthipeptides: BMZ88_RS03370_lanthipeptideNZ_KE384124.1 Lanthipeptides: G597_RS0106700_lanthipeptide

Lanthipeptides: H1R75_RS06635_lanthipeptide

2

EESYCSPKCQTAA

14

+S C+P C+T A

3

SKSLCTPGCKTGA

15

18.2%

NZ_CP085954.1:

Lanthipeptides: LK411_RS13585_lanthipeptide

1

AEESYCSPKCQTAA

14

+S C+P C T A

2

TSKSLCTPGCPTGA

15

17.6%

NC_013656.1and 28 others:

NC_020450.1 Lanthipeptides: LILO_RS03015_lanthipeptideNZ_CP009472.1 Lanthipeptides: LG36_RS03420_lanthipeptideNZ_CP010050.1 Lanthipeptides: QI18_RS03300_lanthipeptideNZ_CP015903.1 Lanthipeptides: LLUC08_RS03255_lanthipeptideNZ_CP024954.1 Lanthipeptides: CV702_RS02990_lanthipeptideNZ_CP065984.1 Lanthipeptides: I6I21_RS02785_lanthipeptideNZ_CP066300.1 Lanthipeptides: LacL0098_RS03205_lanthipeptideNZ_CP090412.1 Lanthipeptides: LZF92_RS09890_lanthipeptideNZ_CP095737.1 Lanthipeptides: MXM90_RS03205_lanthipeptideNZ_CP098790.1 Lanthipeptides: M5C73_RS03405_lanthipeptideNZ_FBTD01000003.1 Lanthipeptides: PB1E_RS03075_lanthipeptideNZ_JAALEQ010000006.1 Lanthipeptides: HFD15_RS10120_lanthipeptideNZ_JAJONJ010000005.1 Lanthipeptides: LSG16_RS07195_lanthipeptideNZ_JAQDWM010000007.1 Lanthipeptides: PGU01_RS08180_lanthipeptideNZ_JAQDXJ010000021.1 Lanthipeptides: PGU19_RS11740_lanthipeptideNZ_JAQDXV010000018.1 Lanthipeptides: PGT80_RS11850_lanthipeptideNZ_JAQDYA010000007.1 Lanthipeptides: PGT72_RS09560_lanthipeptideNZ_JAQDYA010000007.1 Lanthipeptides: PGT72_RS09560_lanthipeptideNZ_JAQEIZ010000019.1 Lanthipeptides: PGX18_RS12025_lanthipeptideNZ_JAQEOU010000022.1 Lanthipeptides: PGV42_RS12330_lanthipeptideNZ_JAQEOV010000015.1 Lanthipeptides: PGW09_RS10765_lanthipeptideNZ_MTJP01000006.1 Lanthipeptides: BW151_RS03795_lanthipeptideNZ_MTJR01000005.1 Lanthipeptides: BW153_RS02980_lanthipeptideNZ_MTJS01000002.1 Lanthipeptides: BW154_RS09850_lanthipeptideNZ_QSTB01000004.1 Lanthipeptides: DXC22_RS03785_lanthipeptideNZ_RAGL01000022.1 Lanthipeptides: D6108_RS11395_lanthipeptideNZ_VSTZ01000009.1 Lanthipeptides: FYK98_RS07445_lanthipeptideNZ_VSTZ01000009.1 Lanthipeptides: FYK98_RS07445_lanthipeptide

Lanthipeptides: LLKF_RS13210_lanthipeptide

4

SYCSPKCQTAA

14

S C+P C+T A

5

SLCTPGCKTGA

15

MIBiG 4.0 matches for allorf_3178073_3178228

17.6%

BGC0000535.4 (ADJ56352.1):

Lanthipeptide: nisin A

4

SYCSPKCQTAA

14

S C+P C+T A

5

SLCTPGCKTGA

15

allorf_3189783_3190004

Leader:

MFDSGLGRVTVVADFEGRLGPPAKGSTRSSRPSRHRVPAA

Core:

VRSRSGRCPAAFRPGVRRLSPSRDARRSCQSKN

Core with dehydrations:

VRDhaRDhaGRCysPAAFRPGVRRLDhaPDhaRDARRDhaCysQDhaKN

antiSMASH-DB 4.0 matches for allorf_3189783_3190004

100.0%

NZ_CP096658.1:

Lanthipeptides: allorf_3189783_3190004_lanthipeptide

1

VRSRSGRCPAAFRPGVRRLSPSRDARRSCQSKN

33

VRSRSGRCPAAFRPGVRRLSPSRDARRSCQSKN

1

VRSRSGRCPAAFRPGVRRLSPSRDARRSCQSKN

33

32.5%

NC_016582.1and 1 other:

NC_016582.1 Lanthipeptides: allorf_08370433_08370603_lanthipeptide

Lanthipeptides: allorf_08370433_08370603_lanthipeptide

3

SRSGRCPAAFRPGVR-RLSPSR

23

+R+GR PA FRP VR R P+R

8

NRAGRGPA-FRPAVRQRAHPAR

28

27.9%

NZ_CP017169.1and 1 other:

NZ_CP017172.1 Lanthipeptides: allorf_8132949_8133116_lanthipeptide

Lanthipeptides: allorf_8050142_8050309_lanthipeptide

3

SRSGRCPAAFRPGVRRLSPSRDARRSCQ

30

S+S R P FRP R+S RRS

2

SQSSRAPRLFRPNPARVSSRPWGRRSVH

29

with 1 more sequence matches

24.2%

NZ_LMHM01000001.1:

Lanthipeptides: allorf_734316_734534_lanthipeptide

3

SRSGRCPAAFRPG

15

SR GRC AF G

6

SRDGRCVCAFMKG

18

allorf_3198246_3198419

Leader:

MRGRLCGPLFDAPNEARRENIPQSDREREGA

Core:

FEAVVATILAVSSQSICSLKGTATHS

Core with dehydrations:

FEAVVADhbILAVDhaDhaQDhaICysDhaLKGDhbADhbHDha

antiSMASH-DB 4.0 matches for allorf_3198246_3198419

100.0%

NZ_CP096658.1:

Lanthipeptides: allorf_3198246_3198419_lanthipeptide

1

FEAVVATILAVSSQSICSLKGTATHS

26

FEAVVATILAVSSQSICSLKGTATHS

1

FEAVVATILAVSSQSICSLKGTATHS

26

13.3%

NZ_JAGFWR010000004.1:

Lanthipeptides: allorf_403554_403718_lanthipeptide

11

VSSQSICSLKGTAT

24

V+SQS+C ++ A

21

VASQSVCRIRRAAN

34

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lanthipeptides

Core peptide predictions

M0R88_RS16185 - Class II

Cleavage pHMM score: -5.60

RODEO score: 0

Monoisotopic mass: 5034.1 Da

Molecular weight: 5037.4 Da

Number of bridges: 4

Alternative weights: (assuming N unmodified Ser/Thr residues); 5055.4 Da N = 1; 5073.4 Da N = 2

allorf_3178073_3178228 - Class II

Cleavage pHMM score: -3.20

RODEO score: 0

Monoisotopic mass: 1432.6 Da

Molecular weight: 1433.6 Da

Number of bridges: 2

Alternative weights: (assuming N unmodified Ser/Thr residues); 1451.6 Da N = 1

allorf_3189783_3190004 - Class II

Cleavage pHMM score: -4.60

RODEO score: 0

Monoisotopic mass: 3605.0 Da

Molecular weight: 3607.1 Da

Number of bridges: 2

Alternative weights: (assuming N unmodified Ser/Thr residues); 3625.1 Da N = 1; 3643.1 Da N = 2; 3661.1 Da N = 3; 3679.2 Da N = 4

allorf_3198246_3198419 - Class II

Cleavage pHMM score: -5.40

RODEO score: 0

Monoisotopic mass: 2475.4 Da

Molecular weight: 2476.8 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 2494.8 Da N = 1; 2512.9 Da N = 2; 2530.9 Da N = 3; 2548.9 Da N = 4; 2566.9 Da N = 5; 2584.9 Da N = 6; 2603.0 Da N = 7

NZ_CP096658.1 - Region 9 - terpene-precursor

Download region GenBank file

Download region SVG

Location: 3,200,516 - 3,221,577 nt. (total: 21,062 nt) Show pHMM detection rules used

terpene-precursor: (PT_FPPS_like and not PT_HPP)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: oxidoreductase

M0R88_RS16310: oxidoreductase

smcogs: SMCOG1083: oxidoreductase

Transferases: aminotransferase

M0R88_RS16290: aminotransferase

smcogs: SMCOG1019: aminotransferase

Ligases: synthetase

M0R88_RS16330: Polyprenyl synthetase

smcogs: SMCOG1182: Polyprenyl synthetase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000677.5	0.41	terpene	cyclooctatin	Streptomyces melanosporofaciens
BGC0000639.3	0.37	terpene	carotenoid	Enterobacteriaceae bacterium DC260
BGC0001911.3	0.37	terpene	raimonol	Streptomyces anulatus
BGC0001485.4	0.37	other (other)	chuangxinmycin	Actinoplanes tsinanensis
BGC0000642.3	0.37	terpene	carotenoid	Enterobacteriaceae bacterium DC413
BGC0002309.2	0.36	terpene	cattleyene	Streptomyces cattleya NRRL 8057 = DSM 46488
BGC0001972.4	0.36	other (other)	toxoflavin, fervenulin	Streptomyces hiroshimensis
BGC0001910.4	0.35	terpene	cyslabdan A, cyslabdan B, cyslabdan C	Streptomyces cyslabdanicus
BGC0000648.3	0.34	terpene	carotenoid	Myxococcus xanthus
BGC0000644.3	0.34	terpene	carotenoid	Dietzia sp. CQ4

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000677.5	0.41	terpene	cyclooctatin	Streptomyces melanosporofaciens
BGC0000639.3	0.37	terpene	carotenoid	Enterobacteriaceae bacterium DC260
BGC0001911.3	0.37	terpene	raimonol	Streptomyces anulatus
BGC0001485.4	0.37	other (other)	chuangxinmycin	Actinoplanes tsinanensis
BGC0000642.3	0.37	terpene	carotenoid	Enterobacteriaceae bacterium DC413
BGC0002309.2	0.36	terpene	cattleyene	Streptomyces cattleya NRRL 8057 = DSM 46488
BGC0001972.4	0.36	other (other)	toxoflavin, fervenulin	Streptomyces hiroshimensis
BGC0001910.4	0.35	terpene	cyslabdan A, cyslabdan B, cyslabdan C	Streptomyces cyslabdanicus
BGC0000648.3	0.34	terpene	carotenoid	Myxococcus xanthus
BGC0000644.3	0.34	terpene	carotenoid	Dietzia sp. CQ4

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Product name	Chain length	Initial cyclisations	Functional groups
sesquiterpene precursor	FPP	C15	acyclic	PP
diterpene precursor	GGPP	C20	acyclic	PP
sesterterpene precursor	GFPP	C25	acyclic	PP
triterpene precursor	HPP	C30	acyclic	PP

Genes with terpene domains:

M0R88_RS16330: PT_FPPS_like

Domain 1 (40 - 351): Prenyltransferase; Farnesyl diphosphate synthase like

Subtype: unknown

Reactions:: IPP, DMAPP → FPP; IPP, DMAPP → GGPP; IPP, DMAPP → GFPP; IPP, DMAPP → HPP

Terpene

Glossary

Acronym	Full name
DMAPP	Dimethylallyl diphosphate
FPP	Farnesyl diphosphate
GFPP	Geranylfarnesyl diphosphate
GGPP	Geranylgeranyl diphosphate
HPP	Hexaprenyl diphosphate
IPP	Isopentenyl diphosphate
PP	Diphosphate

NZ_CP096658.1 - Region 10 - terpene

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Location: 3,295,237 - 3,316,322 nt. (total: 21,086 nt) Show pHMM detection rules used

terpene: (PT_phytoene_like or phytoene_synt or Lycopene_cycl or Lycopene_cycl_fung or T1TS or T1TS_KS or T2TS or TS_UbiA or TS_Pyr4)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: dehydrogenase oxidoreductase

M0R88_RS16825: acyl-CoA dehydrogenase

smcogs: SMCOG1006: acyl-CoA dehydrogenase

M0R88_RS16855: 3-hydroxybutyryl-CoA dehydrogenase

smcogs: SMCOG1095: 3-hydroxybutyryl-CoA dehydrogenase

M0R88_RS16895: oxidoreductase

smcogs: SMCOG1079: oxidoreductase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000706.3	0.45	saccharide	kanamycin	Streptomyces kanamyceticus
BGC0002284.3	0.43	other (other)	corynecin III, corynecin I, corynecin II	Rhodococcus sp. H-CA8f
BGC0000278.3	0.42	PKS	urdamycin	Streptomyces fradiae
BGC0000207.5	0.39	PKS	chartreusin	Streptomyces chartreusis
BGC0000719.5	0.38	saccharide	tobramycin	Streptoalloteichus hindustanus
BGC0000720.3	0.36	saccharide	tobramycin	Streptoalloteichus tenebrarius
BGC0001464.3	0.35	other (other)	tetrabromopyrrole	Pseudoalteromonas sp. PS5
BGC0001463.4	0.35	other (other)	2,3,4,5-tetrabromopyrrole	Pseudoalteromonas piscicida
BGC0002091.3	0.34	NRPS	holomycin	Yersinia ruckeri ATCC 29473
BGC0002147.2	0.33	NRPS	bohemamine A, bohemamine B, bohemamine C	Streptomyces sp. CB02009

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000706.3	0.45	saccharide	kanamycin	Streptomyces kanamyceticus
BGC0002284.3	0.43	other (other)	corynecin III, corynecin I, corynecin II	Rhodococcus sp. H-CA8f
BGC0000278.3	0.42	PKS	urdamycin	Streptomyces fradiae
BGC0000207.5	0.39	PKS	chartreusin	Streptomyces chartreusis
BGC0000719.5	0.38	saccharide	tobramycin	Streptoalloteichus hindustanus
BGC0000720.3	0.36	saccharide	tobramycin	Streptoalloteichus tenebrarius
BGC0001464.3	0.35	other (other)	tetrabromopyrrole	Pseudoalteromonas sp. PS5
BGC0001463.4	0.35	other (other)	2,3,4,5-tetrabromopyrrole	Pseudoalteromonas piscicida
BGC0002091.3	0.34	NRPS	holomycin	Yersinia ruckeri ATCC 29473
BGC0002147.2	0.33	NRPS	bohemamine A, bohemamine B, bohemamine C	Streptomyces sp. CB02009

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Subclass	Product name	Chain length	Initial cyclisations	Functional groups
triterpene		squalene	C30	acyclic	none
triterpene	C30 carotenoid	diapophytoene	C30	acyclic	none
triterpene		PSPP	C30	acyclic	PP
tetraterpene	C40 carotenoid	phytoene	C40	acyclic	none
triterpene		hydroxysqualene	C30	acyclic	OH

Genes with terpene domains:

M0R88_RS16845: PT_phytoene_like

Domain 1 (26 - 293): Prenyltransferase; Phytoene synthase like

Subtype: unknown

Reactions:: FPP → squalene; FPP → diapophytoene; FPP → PSPP; GGPP → phytoene; PSPP → hydroxysqualene

Terpene

Glossary

Acronym	Full name
FPP	Farnesyl diphosphate
GGPP	Geranylgeranyl diphosphate
PP	Diphosphate
PSPP	Presqualene diphosphate