GCF_900055005.2 - 10 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_FHRS02000001.1 (Streptococcus pneumoniae)

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 1.1	RiPP-like	124,495	134,794

NZ_FHRS02000002.1 (Streptococcus pneumoniae)

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 2.1	T3PKS	94,696	135,868

NZ_FHRS02000008.1 (Streptococcus pneumoniae)

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 8.1	RiPP-like	82,397	92,693

NZ_FHRS02000009.1 (Streptococcus pneumoniae)

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 9.1	RiPP-like	1	5,965

NZ_FHRS02000011.1 (Streptococcus pneumoniae)

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 11.1	terpene-precursor	46,452	64,439

NZ_FHRS02000012.1 (Streptococcus pneumoniae)

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 12.1	lanthipeptide-class-i	1	18,392
Region 12.2	RiPP-like	33,350	53,346

NZ_FHRS02000020.1 (Streptococcus pneumoniae)

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 20.1	RiPP-like	1	13,217

NZ_FHRS02000026.1 (Streptococcus pneumoniae)

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 26.1	RiPP-like	11,124	23,792

NZ_FHRS02000028.1 (Streptococcus pneumoniae)

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 28.1	lanthipeptide-class-ii	1	21,187

Region	Type	From	To	Most similar known cluster
Region 1.1	RiPP-like	124,495	134,794
Region 2.1	T3PKS	94,696	135,868
Region 8.1	RiPP-like	82,397	92,693
Region 9.1	RiPP-like	1	5,965
Region 11.1	terpene-precursor	46,452	64,439
Region 12.1	lanthipeptide-class-i	1	18,392
Region 12.2	RiPP-like	33,350	53,346
Region 20.1	RiPP-like	1	13,217
Region 26.1	RiPP-like	11,124	23,792
Region 28.1	lanthipeptide-class-ii	1	21,187

No secondary metabolite regions were found in these records:: NZ_FHRS02000003.1 (Streptococcus pneumoniae); NZ_FHRS02000004.1 (Streptococcus pneumoniae); NZ_FHRS02000005.1 (Streptococcus pneumoniae); NZ_FHRS02000006.1 (Streptococcus pneumoniae); NZ_FHRS02000007.1 (Streptococcus pneumoniae); NZ_FHRS02000010.1 (Streptococcus pneumoniae); NZ_FHRS02000013.1 (Streptococcus pneumoniae); NZ_FHRS02000014.1 (Streptococcus pneumoniae); NZ_FHRS02000015.1 (Streptococcus pneumoniae); NZ_FHRS02000016.1 (Streptococcus pneumoniae); NZ_FHRS02000017.1 (Streptococcus pneumoniae); NZ_FHRS02000018.1 (Streptococcus pneumoniae); NZ_FHRS02000019.1 (Streptococcus pneumoniae); NZ_FHRS02000021.1 (Streptococcus pneumoniae); NZ_FHRS02000022.1 (Streptococcus pneumoniae); NZ_FHRS02000023.1 (Streptococcus pneumoniae); NZ_FHRS02000024.1 (Streptococcus pneumoniae); NZ_FHRS02000025.1 (Streptococcus pneumoniae); NZ_FHRS02000027.1 (Streptococcus pneumoniae); NZ_FHRS02000029.1 (Streptococcus pneumoniae); NZ_FHRS02000030.1 (Streptococcus pneumoniae); NZ_FHRS02000031.1 (Streptococcus pneumoniae); NZ_FHRS02000032.1 (Streptococcus pneumoniae); NZ_FHRS02000033.1 (Streptococcus pneumoniae); NZ_FHRS02000034.1 (Streptococcus pneumoniae); NZ_FHRS02000035.1 (Streptococcus pneumoniae); NZ_FHRS02000036.1 (Streptococcus pneumoniae); NZ_FHRS02000037.1 (Streptococcus pneumoniae); NZ_FHRS02000038.1 (Streptococcus pneumoniae); NZ_FHRS02000039.1 (Streptococcus pneumoniae); NZ_FHRS02000040.1 (Streptococcus pneumoniae); NZ_FHRS02000041.1 (Streptococcus pneumoniae); NZ_FHRS02000042.1 (Streptococcus pneumoniae); NZ_FHRS02000043.1 (Streptococcus pneumoniae); NZ_FHRS02000044.1 (Streptococcus pneumoniae); NZ_FHRS02000045.1 (Streptococcus pneumoniae); NZ_FHRS02000046.1 (Streptococcus pneumoniae); NZ_FHRS02000047.1 (Streptococcus pneumoniae)

Compact view

NZ_FHRS02000001.1 - Region 1 - RiPP-like

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Location: 124,495 - 134,794 nt. (total: 10,300 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

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Gene details

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Gene overview

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Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Hydrolases: back translocase

A1898_RS00705: GTP-binding protein LepA

smcogs: SMCOG1190: GTP-binding protein LepA

Ligases: synthase

A1898_RS00710: Pseudouridine synthase

smcogs: SMCOG1154: Pseudouridine synthase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002306.2	0.42	ribosomal	freyrasin	Paenibacillus polymyxa ATCC 842
BGC0001638.4	0.40	ribosomal	klebsazolicin	Klebsiella pneumoniae subsp. ozaenae
BGC0001639.3	0.40	ribosomal	klebsidin	Klebsiella pneumoniae
BGC0000504.5	0.40	ribosomal	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000500.5	0.39	ribosomal	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0002382.3	0.39	ribosomal	grimoviridin	Grimontia marina
BGC0001525.3	0.37	other (other)	bartoloside B, bartoloside C, bartoloside D	Synechocystis salina LEGE 06155
BGC0001526.4	0.36	other (other)	bartoloside E, bartoloside F, bartoloside G, bartoloside H, bartoloside I, bartoloside J, bartoloside K	Synechocystis salina LEGE 06099
BGC0000538.3	0.36	ribosomal	nisin Z	Lactococcus lactis
BGC0002322.3	0.36	ribosomal	citrocin	Citrobacter pasteurii

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002306.2	0.42	ribosomal	freyrasin	Paenibacillus polymyxa ATCC 842
BGC0001638.4	0.40	ribosomal	klebsazolicin	Klebsiella pneumoniae subsp. ozaenae
BGC0001639.3	0.40	ribosomal	klebsidin	Klebsiella pneumoniae
BGC0000504.5	0.40	ribosomal	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000500.5	0.39	ribosomal	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0002382.3	0.39	ribosomal	grimoviridin	Grimontia marina
BGC0001525.3	0.37	other (other)	bartoloside B, bartoloside C, bartoloside D	Synechocystis salina LEGE 06155
BGC0001526.4	0.36	other (other)	bartoloside E, bartoloside F, bartoloside G, bartoloside H, bartoloside I, bartoloside J, bartoloside K	Synechocystis salina LEGE 06099
BGC0000538.3	0.36	ribosomal	nisin Z	Lactococcus lactis
BGC0002322.3	0.36	ribosomal	citrocin	Citrobacter pasteurii

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Transcription Factor Binding Sites

Binding sites found:

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 22.31 out of 26.06

Confidence: medium

Additional weak hits (2):

VqsM

Description: Regulator of quorum-sensing signalling systems
Species: Pseudomonas aeruginosa PAO1
Score: 16.66 out of 20.47

Confidence: weak

HexR

Description: Glucose-responsive regulator
Species: Shewanella oneidensis MR-1
Score: 24.88 out of 31.73

Confidence: weak

TFBS Finder

TFBS definitions

Regulator	Description
MogR	Repressor of flagellar motility genes

NZ_FHRS02000002.1 - Region 1 - T3PKS

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Location: 94,696 - 135,868 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

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Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

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Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: reductase

A1898_RS01590: hydroxymethylglutaryl-CoA reductase

smcogs: SMCOG1187: hydroxymethylglutaryl-CoA reductase

Transferases: formyltransferase methyltransferase phosphotransferase

A1898_RS01575: Glucose-specific phosphotransferase enzyme IIA

smcogs: SMCOG1145: Glucose-specific phosphotransferase enzyme IIA

A1898_RS01635: methionyl-tRNA formyltransferase

smcogs: SMCOG1228: methionyl-tRNA formyltransferase

A1898_RS01675: methyltransferase

smcogs: SMCOG1248: methyltransferase

Hydrolases: hydrolase

A1898_RS01685: isochorismatase

smcogs: SMCOG1027: isochorismatase

Ligases: synthase

A1898_RS01595: hydroxymethylglutaryl-CoA synthase

smcogs: SMCOG1043: hydroxymethylglutaryl-CoA synthase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002700.2	0.45	ribosomal	bacinapeptin	Bacillus nakamurai
BGC0000519.4	0.45	ribosomal	labyrinthopeptin A2, labyrinthopeptin A1, labyrinthopeptin A3	Actinomadura namibiensis
BGC0002111.3	0.43	ribosomal	andalusicin A, andalusicin B	Bacillus thuringiensis serovar andalousiensis NRRL B-23139
BGC0000558.5	0.42	ribosomal	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0001521.3	0.41	NRPS	auriculamide	Herpetosiphon aurantiacus DSM 785
BGC0000486.4	0.41	ribosomal	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0002561.3	0.40	other (other)	phenazine SA, phenazine SB, phenazine SC	Streptomyces sp.
BGC0000592.5	0.40	ribosomal	microviridin B	Microcystis aeruginosa NIES-298
BGC0000616.4	0.40	ribosomal	amylocyclicin	Bacillus velezensis FZB42
BGC0000205.3	0.40	PKS	bryostatin	Candidatus Endobugula sertula

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002700.2	0.45	ribosomal	bacinapeptin	Bacillus nakamurai
BGC0000519.4	0.45	ribosomal	labyrinthopeptin A2, labyrinthopeptin A1, labyrinthopeptin A3	Actinomadura namibiensis
BGC0002111.3	0.43	ribosomal	andalusicin A, andalusicin B	Bacillus thuringiensis serovar andalousiensis NRRL B-23139
BGC0000558.5	0.42	ribosomal	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0001521.3	0.41	NRPS	auriculamide	Herpetosiphon aurantiacus DSM 785
BGC0000486.4	0.41	ribosomal	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0002561.3	0.40	other (other)	phenazine SA, phenazine SB, phenazine SC	Streptomyces sp.
BGC0000592.5	0.40	ribosomal	microviridin B	Microcystis aeruginosa NIES-298
BGC0000616.4	0.40	ribosomal	amylocyclicin	Bacillus velezensis FZB42
BGC0000205.3	0.40	PKS	bryostatin	Candidatus Endobugula sertula

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Transcription Factor Binding Sites

Binding sites found:

CcpA

Description: Catabolite control protein A
Species: Streptococcus & Clostridium sp.
Score: 19.14 out of 20.97

Confidence: strong

ColR

Description: Phenol-responsive regulator
Species: Pseudomonas putida KT2440
Score: 23.40 out of 30.25

Confidence: medium

CodY

Description: Regulator of stationary phase and virulence in Gram-positive bacteria
Species: Bacillus, Lactococcus & Streptococcus sp.
Score: 27.71 out of 27.78

Confidence: strong

ToxT

Description: Regulator of MSHA biosynthesis
Species: Vibrio cholerae O395
Score: 18.57 out of 18.57

Confidence: strong

IolR

Description: Regulator of the inositol catabolism
Species: Caulobacter crescentus CB15
Score: 19.12 out of 23.79

Confidence: medium

Additional weak hits (4):

CopR

Description: Copper-responsive regulator
Species: Lactococcus lactis subsp. lactis Il1403
Score: 23.25 out of 30.97

Confidence: weak

FuR variant 2

Description: Ferric Uptake Regulator
Species: Caulobacter crescentus CB15
Score: 23.54 out of 32.74

Confidence: weak

MntR

Description: Manganese transport regulator
Species: Escherichia coli str. K-12 substr. MG1655
Score: 25.02 out of 39.62

Confidence: weak

OsdR

Description: Development and stress management regulator
Species: Streptomyces coelicolor
Score: 21.39 out of 30.12

Confidence: weak

TFBS Finder

TFBS definitions

Regulator	Description
CcpA	Catabolite control protein A
CodY	Regulator of stationary phase and virulence in Gram-positive bacteria
ColR	Phenol-responsive regulator
IolR	Regulator of the inositol catabolism
ToxT	Regulator of MSHA biosynthesis

NZ_FHRS02000008.1 - Region 1 - RiPP-like

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Location: 82,397 - 92,693 nt. (total: 10,297 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

TFBS Finder

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

No tailoring functions detected.

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002306.2	0.42	ribosomal	freyrasin	Paenibacillus polymyxa ATCC 842
BGC0001639.3	0.40	ribosomal	klebsidin	Klebsiella pneumoniae
BGC0001638.4	0.40	ribosomal	klebsazolicin	Klebsiella pneumoniae subsp. ozaenae
BGC0000571.3	0.36	ribosomal	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0000513.3	0.36	ribosomal	Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3	Saccharopolyspora erythraea NRRL 2338
BGC0000551.5	0.36	ribosomal	SapB	Streptomyces coelicolor A3(2)
BGC0000504.5	0.36	ribosomal	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0002698.2	0.35	ribosomal	phaeornamide	Pseudophaeobacter arcticus DSM 23566
BGC0000501.3	0.35	ribosomal	catenulipeptin	Catenulispora acidiphila DSM 44928
BGC0000500.5	0.35	ribosomal	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002306.2	0.42	ribosomal	freyrasin	Paenibacillus polymyxa ATCC 842
BGC0001639.3	0.40	ribosomal	klebsidin	Klebsiella pneumoniae
BGC0001638.4	0.40	ribosomal	klebsazolicin	Klebsiella pneumoniae subsp. ozaenae
BGC0000571.3	0.36	ribosomal	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0000513.3	0.36	ribosomal	Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3	Saccharopolyspora erythraea NRRL 2338
BGC0000551.5	0.36	ribosomal	SapB	Streptomyces coelicolor A3(2)
BGC0000504.5	0.36	ribosomal	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0002698.2	0.35	ribosomal	phaeornamide	Pseudophaeobacter arcticus DSM 23566
BGC0000501.3	0.35	ribosomal	catenulipeptin	Catenulispora acidiphila DSM 44928
BGC0000500.5	0.35	ribosomal	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Transcription Factor Binding Sites

Binding sites found:

ToxT

Description: Regulator of MSHA biosynthesis
Species: Vibrio cholerae O395
Score: 18.31 out of 18.57

Confidence: strong

Additional weak hits (3):

PerR

Description: Peroxide regulator
Species: Bacillus & Staphylococcus sp.
Score: 22.05 out of 28.14

Confidence: weak

CsoR

Description: Copper-responsive repressor
Species: Streptomyces lividans
Score: 20.67 out of 32.38

Confidence: weak

HypR

Description: L-hydroxyproline utilization repressor
Species: Streptomyces coelicolor
Score: 18.94 out of 22.40

Confidence: weak

TFBS Finder

TFBS definitions

Regulator	Description
ToxT	Regulator of MSHA biosynthesis

NZ_FHRS02000009.1 - Region 1 - RiPP-like

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Location: 1 - 5,965 nt. (total: 5,965 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

TFBS Finder

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

No tailoring functions detected.

Similar gene clusters

Analysis type:

Reference	RiPP-like	Similarity score	Type	Compound(s)	Organism
BGC0000119.5		0.22	PKS, saccharide	7-deoxypactamycin	Streptomyces pactum

Reference	Aggregated	Similarity score	Type	Compound(s)	Organism
BGC0000119.5		0.22	PKS, saccharide	7-deoxypactamycin	Streptomyces pactum

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Transcription Factor Binding Sites

Binding sites found:

LexA variant 2

Description: Repressor of DNA damage response
Species: Bacillus subtilis subsp. subtilis str. 168
Score: 20.08 out of 24.78

Confidence: medium

TFBS Finder

TFBS definitions

Regulator	Description
LexA variant 2	Repressor of DNA damage response

NZ_FHRS02000011.1 - Region 1 - terpene-precursor

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Location: 46,452 - 64,439 nt. (total: 17,988 nt) Show pHMM detection rules used

Region on contig edge.

terpene-precursor: (PT_FPPS_like and not PT_HPP)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

TFBS Finder

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Hydrolases: back translocase

A1898_RS06035: GTP-binding protein LepA

smcogs: SMCOG1190: GTP-binding protein LepA

Ligases: synthetase

A1898_RS06010: Polyprenyl synthetase

smcogs: SMCOG1182: Polyprenyl synthetase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002397.2	0.47	terpene	astallatene	Arabidopsis thaliana
BGC0002400.2	0.44	terpene	boleracene	Brassica oleracea var. oleracea
BGC0002398.2	0.38	terpene	(-)-ent-quiannulatene	Arabidopsis thaliana
BGC0001605.3	0.32	terpene	gibberellin	Sinorhizobium fredii NGR234
BGC0000648.3	0.31	terpene	carotenoid	Myxococcus xanthus
BGC0001456.3	0.30	terpene	isorenieratene	Streptomyces argillaceus
BGC0001756.3	0.28	terpene	retigeranin, arathanatriene	Arabidopsis thaliana
BGC0000632.5	0.27	saccharide, terpene	brasilicardin A	Nocardia terpenica
BGC0001594.3	0.27	other (other)	fischerindole L	Fischerella muscicola UTEX 1829
BGC0001595.3	0.26	other (other)	fischerindole	Fischerella sp. SAG 46.79

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002397.2	0.47	terpene	astallatene	Arabidopsis thaliana
BGC0002400.2	0.44	terpene	boleracene	Brassica oleracea var. oleracea
BGC0002398.2	0.38	terpene	(-)-ent-quiannulatene	Arabidopsis thaliana
BGC0001605.3	0.32	terpene	gibberellin	Sinorhizobium fredii NGR234
BGC0000648.3	0.31	terpene	carotenoid	Myxococcus xanthus
BGC0001456.3	0.30	terpene	isorenieratene	Streptomyces argillaceus
BGC0001756.3	0.28	terpene	retigeranin, arathanatriene	Arabidopsis thaliana
BGC0000632.5	0.27	saccharide, terpene	brasilicardin A	Nocardia terpenica
BGC0001594.3	0.27	other (other)	fischerindole L	Fischerella muscicola UTEX 1829
BGC0001595.3	0.26	other (other)	fischerindole	Fischerella sp. SAG 46.79

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Subclass	Product name	Chain length	Initial cyclisations	Functional groups
sesquiterpene precursor		FPP	C15	acyclic	PP

Genes with terpene domains:

A1898_RS06010: PT_FPPS_like

Domain 1 (27 - 272): Prenyltransferase; Farnesyl diphosphate synthase like

Subtype: Farnesyl diphosphate synthase, bacterial

Reactions:: DMAPP, IPP → FPP

Transcription Factor Binding Sites

Binding sites found:

AfsR

Description: Pleiotropic regulatory for antibiotic production
Species: Streptomyces coelicolor
Score: 19.59 out of 23.05

Confidence: medium

AbrC3

Description: Antibiotic production activator
Species: Streptomyces coelicolor
Score: 16.22 out of 18.16

Confidence: strong

CodY

Description: Regulator of stationary phase and virulence in Gram-positive bacteria
Species: Bacillus, Lactococcus & Streptococcus sp.
Score: 22.39 out of 27.78

Confidence: medium

ZuR variant 1

Description: Zinc-responsive repressor
Species: Streptomyces coelicolor
Score: 23.47 out of 28.19

Confidence: medium

Terpene

TFBS Finder

Glossary

Acronym	Full name
DMAPP	Dimethylallyl diphosphate
FPP	Farnesyl diphosphate
IPP	Isopentenyl diphosphate
PP	Diphosphate

TFBS definitions

Regulator	Description
AbrC3	Antibiotic production activator
AfsR	Pleiotropic regulatory for antibiotic production
CodY	Regulator of stationary phase and virulence in Gram-positive bacteria
ZuR variant 1	Zinc-responsive repressor

NZ_FHRS02000012.1 - Region 1 - lanthipeptide-class-i

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Location: 1 - 18,392 nt. (total: 18,392 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-i: (((Lant_dehydr_N or Lant_dehydr_C) and cds(LANC_like and not Pkinase)) and not (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

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Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Lanthipeptides

TFBS Finder

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: dehydrogenase

A1898_RS06100: nucleotide sugar dehydrogenase

smcogs: SMCOG1152: nucleotide sugar dehydrogenase

Transferases: glycosyltransferase

A1898_RS06130: glycosyl transferase group 1

smcogs: SMCOG1045: glycosyl transferase group 1

Hydrolases: hydrolase

A1898_RS06110: asparagine synthase (glutamine-hydrolyzing)

smcogs: SMCOG1177: asparagine synthase (glutamine-hydrolyzing)

Lyases: cyclase dehydratase

A1898_RS06080: Lanthionine synthetase C family protein

smcogs: SMCOG1140: Lanthionine synthetase C family protein

A1898_RS06085: Lantibiotic dehydratase domain protein

smcogs: SMCOG1155: Lantibiotic dehydratase domain protein

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000541.5	0.50	ribosomal	paenicidin A	Paenibacillus polymyxa
BGC0000531.3	0.50	ribosomal	mutacin I	Streptococcus mutans
BGC0000757.3	0.48	saccharide	capsular polysaccharide	Avibacterium paragallinarum
BGC0000542.3	0.48	ribosomal	paenicidin B	Paenibacillus terrae
BGC0000538.3	0.48	ribosomal	nisin Z	Lactococcus lactis
BGC0000756.3	0.47	saccharide	capsular polysaccharide	Avibacterium paragallinarum
BGC0001289.5	0.47	ribosomal	penisin	Paenibacillus ehimensis
BGC0000754.3	0.47	saccharide	capsular polysaccharide	Avibacterium paragallinarum
BGC0000755.3	0.47	saccharide	capsular polysaccharide	Avibacterium paragallinarum 221
BGC0002323.2	0.45	ribosomal	nisin J	Staphylococcus capitis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000541.5	0.50	ribosomal	paenicidin A	Paenibacillus polymyxa
BGC0000531.3	0.50	ribosomal	mutacin I	Streptococcus mutans
BGC0000757.3	0.48	saccharide	capsular polysaccharide	Avibacterium paragallinarum
BGC0000542.3	0.48	ribosomal	paenicidin B	Paenibacillus terrae
BGC0000538.3	0.48	ribosomal	nisin Z	Lactococcus lactis
BGC0000756.3	0.47	saccharide	capsular polysaccharide	Avibacterium paragallinarum
BGC0001289.5	0.47	ribosomal	penisin	Paenibacillus ehimensis
BGC0000754.3	0.47	saccharide	capsular polysaccharide	Avibacterium paragallinarum
BGC0000755.3	0.47	saccharide	capsular polysaccharide	Avibacterium paragallinarum 221
BGC0002323.2	0.45	ribosomal	nisin J	Staphylococcus capitis

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Transcription Factor Binding Sites

Binding sites found:

CatR

Description: H2O2-responsive repressor
Species: Streptomyces coelicolor
Score: 21.45 out of 25.31

Confidence: medium

Additional weak hits (1):

CsoR

Description: Copper-responsive repressor
Species: Streptomyces lividans
Score: 20.19 out of 32.38

Confidence: weak

Lanthipeptides

RREFinder

TFBS Finder

Core peptide predictions

No core peptides found.

RRE predictions

: RRE type: Lanthipeptide_LanB_RRE; Location: 154 - 221; Score: 29.1

TFBS definitions

Regulator	Description
CatR	H2O2-responsive repressor

NZ_FHRS02000012.1 - Region 2 - RiPP-like

Download region GenBank file

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Location: 33,350 - 53,346 nt. (total: 19,997 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

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Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

TFBS Finder

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Hydrolases: hydrolase

A1898_RS06295: HAD-superfamily hydrolase, subfamily IA, variant

smcogs: SMCOG1115: HAD-superfamily hydrolase, subfamily IA, variant

Lyases: lyase

A1898_RS06245: argininosuccinate lyase/adenylosuccinate lyase

smcogs: SMCOG1063: argininosuccinate lyase/adenylosuccinate lyase

Ligases: synthase

A1898_RS06250: argininosuccinate synthase

smcogs: SMCOG1291: argininosuccinate synthase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000558.5	0.48	ribosomal	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0000623.3	0.48	ribosomal	plantaricin W α, plantaricin W β	Lactobacillus plantarum
BGC0002579.2	0.47	ribosomal	carnobacteriocin XY	Carnobacterium maltaromaticum
BGC0002674.2	0.46	ribosomal	enterocin F4-9	Enterococcus faecalis
BGC0001862.4	0.44	ribosomal	pallidocin	Aeribacillus pallidus
BGC0000504.5	0.44	ribosomal	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000554.4	0.44	ribosomal	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0002698.2	0.44	ribosomal	phaeornamide	Pseudophaeobacter arcticus DSM 23566
BGC0001229.4	0.43	ribosomal	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0002577.2	0.43	ribosomal	lactococcin G	Lactococcus lactis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000558.5	0.48	ribosomal	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0000623.3	0.48	ribosomal	plantaricin W α, plantaricin W β	Lactobacillus plantarum
BGC0002579.2	0.47	ribosomal	carnobacteriocin XY	Carnobacterium maltaromaticum
BGC0002674.2	0.46	ribosomal	enterocin F4-9	Enterococcus faecalis
BGC0001862.4	0.44	ribosomal	pallidocin	Aeribacillus pallidus
BGC0000504.5	0.44	ribosomal	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000554.4	0.44	ribosomal	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0002698.2	0.44	ribosomal	phaeornamide	Pseudophaeobacter arcticus DSM 23566
BGC0001229.4	0.43	ribosomal	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0002577.2	0.43	ribosomal	lactococcin G	Lactococcus lactis

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Transcription Factor Binding Sites

Binding sites found:

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 25.42 out of 26.06

Confidence: strong

ANR

Description: Anaerobic transcriptional regulator
Species: Pseudomonas putida KT2440
Score: 21.57 out of 26.33

Confidence: medium

LexA variant 3

Description: Repressor of DNA damage response
Species: Escherichia coli str. K-12 substr. MG1655
Score: 25.52 out of 32.93

Confidence: medium

Additional weak hits (3):

HexR

Description: Glucose-responsive regulator
Species: Shewanella oneidensis MR-1
Score: 23.57 out of 31.73

Confidence: weak

HexR

Description: Glucose-responsive regulator
Species: Shewanella oneidensis MR-1
Score: 26.23 out of 31.73

Confidence: weak

ZuR variant 2

Description: Zinc-responsive repressor
Species: Pseudomonas protegens Pf-5
Score: 24.79 out of 33.14

Confidence: weak

TFBS Finder

TFBS definitions

Regulator	Description
ANR	Anaerobic transcriptional regulator
LexA variant 3	Repressor of DNA damage response
MogR	Repressor of flagellar motility genes

NZ_FHRS02000020.1 - Region 1 - RiPP-like

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Location: 1 - 13,217 nt. (total: 13,217 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

TFBS Finder

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

No tailoring functions detected.

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002577.2	0.56	ribosomal	lactococcin G	Lactococcus lactis
BGC0000624.3	0.55	ribosomal	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0002579.2	0.54	ribosomal	carnobacteriocin XY	Carnobacterium maltaromaticum
BGC0000617.5	0.50	ribosomal	coagulin	Bacillus coagulans
BGC0000619.3	0.50	ribosomal	gassericin T	Lactobacillus gasseri
BGC0001602.3	0.50	ribosomal	gassericin-T	Lactobacillus gasseri
BGC0001388.3	0.50	ribosomal	gassericin E	Lactobacillus gasseri
BGC0000558.5	0.48	ribosomal	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0002005.2	0.46	ribosomal	RaxX	Xanthomonas oryzae pv. oryzae
BGC0002306.2	0.42	ribosomal	freyrasin	Paenibacillus polymyxa ATCC 842

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002577.2	0.56	ribosomal	lactococcin G	Lactococcus lactis
BGC0000624.3	0.55	ribosomal	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0002579.2	0.54	ribosomal	carnobacteriocin XY	Carnobacterium maltaromaticum
BGC0000617.5	0.50	ribosomal	coagulin	Bacillus coagulans
BGC0000619.3	0.50	ribosomal	gassericin T	Lactobacillus gasseri
BGC0001602.3	0.50	ribosomal	gassericin-T	Lactobacillus gasseri
BGC0001388.3	0.50	ribosomal	gassericin E	Lactobacillus gasseri
BGC0000558.5	0.48	ribosomal	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0002005.2	0.46	ribosomal	RaxX	Xanthomonas oryzae pv. oryzae
BGC0002306.2	0.42	ribosomal	freyrasin	Paenibacillus polymyxa ATCC 842

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Transcription Factor Binding Sites

Binding sites found:

CcpA

Description: Catabolite control protein A
Species: Streptococcus & Clostridium sp.
Score: 18.13 out of 20.97

Confidence: medium

LexA variant 2

Description: Repressor of DNA damage response
Species: Bacillus subtilis subsp. subtilis str. 168
Score: 24.43 out of 24.78

Confidence: strong

Additional weak hits (1):

HypR

Description: L-hydroxyproline utilization repressor
Species: Streptomyces coelicolor
Score: 18.94 out of 22.40

Confidence: weak

TFBS Finder

TFBS definitions

Regulator	Description
CcpA	Catabolite control protein A
LexA variant 2	Repressor of DNA damage response

NZ_FHRS02000026.1 - Region 1 - RiPP-like

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Location: 11,124 - 23,792 nt. (total: 12,669 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

TFBS Finder

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

No tailoring functions detected.

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000617.5	0.50	ribosomal	coagulin	Bacillus coagulans
BGC0002579.2	0.50	ribosomal	carnobacteriocin XY	Carnobacterium maltaromaticum
BGC0000623.3	0.49	ribosomal	plantaricin W α, plantaricin W β	Lactobacillus plantarum
BGC0000624.3	0.48	ribosomal	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0000619.3	0.47	ribosomal	gassericin T	Lactobacillus gasseri
BGC0001602.3	0.47	ribosomal	gassericin-T	Lactobacillus gasseri
BGC0001388.3	0.47	ribosomal	gassericin E	Lactobacillus gasseri
BGC0001862.4	0.45	ribosomal	pallidocin	Aeribacillus pallidus
BGC0002577.2	0.44	ribosomal	lactococcin G	Lactococcus lactis
BGC0000504.5	0.43	ribosomal	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000617.5	0.50	ribosomal	coagulin	Bacillus coagulans
BGC0002579.2	0.50	ribosomal	carnobacteriocin XY	Carnobacterium maltaromaticum
BGC0000623.3	0.49	ribosomal	plantaricin W α, plantaricin W β	Lactobacillus plantarum
BGC0000624.3	0.48	ribosomal	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0000619.3	0.47	ribosomal	gassericin T	Lactobacillus gasseri
BGC0001602.3	0.47	ribosomal	gassericin-T	Lactobacillus gasseri
BGC0001388.3	0.47	ribosomal	gassericin E	Lactobacillus gasseri
BGC0001862.4	0.45	ribosomal	pallidocin	Aeribacillus pallidus
BGC0002577.2	0.44	ribosomal	lactococcin G	Lactococcus lactis
BGC0000504.5	0.43	ribosomal	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Transcription Factor Binding Sites

Binding sites found:

RpoN

Description: Regulator of nitrogen assimilation and virulence
Species: Salmonella & Vibrio sp.
Score: 16.73 out of 18.46

Confidence: medium

LexA variant 2

Description: Repressor of DNA damage response
Species: Bacillus subtilis subsp. subtilis str. 168
Score: 20.08 out of 24.78

Confidence: medium

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 22.71 out of 26.06

Confidence: medium

Additional weak hits (1):

LexA variant 3

Description: Repressor of DNA damage response
Species: Escherichia coli str. K-12 substr. MG1655
Score: 23.85 out of 32.93

Confidence: weak

TFBS Finder

TFBS definitions

Regulator	Description
LexA variant 2	Repressor of DNA damage response
MogR	Repressor of flagellar motility genes
RpoN	Regulator of nitrogen assimilation and virulence

NZ_FHRS02000028.1 - Region 1 - lanthipeptide-class-ii

Download region GenBank file

Download region SVG

Location: 1 - 21,187 nt. (total: 21,187 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

binding site

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Lanthipeptides

TFBS Finder

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Hydrolases: protease

A1898_RS09795: alkaline serine protease, subtilase family

smcogs: SMCOG1075: alkaline serine protease, subtilase family

Lyases: cyclase

A1898_RS09815: lanthionine synthetase C family protein

smcogs: SMCOG1070: lanthionine synthetase C family protein

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000500.5	0.56	ribosomal	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000504.5	0.51	ribosomal	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001555.4	0.51	ribosomal	colicin V	Escherichia coli chi7122
BGC0000554.4	0.50	ribosomal	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000590.5	0.50	ribosomal	microcin N	Escherichia coli
BGC0002698.2	0.50	ribosomal	phaeornamide	Pseudophaeobacter arcticus DSM 23566
BGC0000622.5	0.49	ribosomal	megacin	Bacillus megaterium
BGC0000623.3	0.49	ribosomal	plantaricin W α, plantaricin W β	Lactobacillus plantarum
BGC0000502.5	0.49	ribosomal	cerecidin, cerecidin A1, cerecidin A2, cerecidin A3, cerecidin A4, cerecidin A5, cerecidin A6, cerecidin A7	Bacillus cereus
BGC0001407.5	0.49	ribosomal	bicereucin	Bacillus cereus SJ1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000500.5	0.56	ribosomal	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000504.5	0.51	ribosomal	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001555.4	0.51	ribosomal	colicin V	Escherichia coli chi7122
BGC0000554.4	0.50	ribosomal	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000590.5	0.50	ribosomal	microcin N	Escherichia coli
BGC0002698.2	0.50	ribosomal	phaeornamide	Pseudophaeobacter arcticus DSM 23566
BGC0000622.5	0.49	ribosomal	megacin	Bacillus megaterium
BGC0000623.3	0.49	ribosomal	plantaricin W α, plantaricin W β	Lactobacillus plantarum
BGC0000502.5	0.49	ribosomal	cerecidin, cerecidin A1, cerecidin A2, cerecidin A3, cerecidin A4, cerecidin A5, cerecidin A6, cerecidin A7	Bacillus cereus
BGC0001407.5	0.49	ribosomal	bicereucin	Bacillus cereus SJ1

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Lanthipeptide predictions

Lanthipeptide(s) for A1898_RS09815

A1898_RS09820

Leader:

MKNDFVIGKSLKELSLEEMQLVYGG

Core:

TDGADPRSTIICSATLSFIASYLGSAQTRCGKDNKKK

Core with dehydrations:

DhbDGADPRDhaDhbIICysDhaADhbLDhaFIADhaYLGDhaAQDhbRCysGKDNKKK

antiSMASH-DB 4.0 matches for A1898_RS09820

100.0%

NC_003028.3and 45 others:

NC_003098.1 Lanthipeptides: SPR_RS08865_lanthipeptideNC_011900.1 Lanthipeptides: SPN23F_RS10050_lanthipeptideNC_012466.1 Lanthipeptides: SPJ_RS09635_lanthipeptideNZ_CFDV01000030.1 Lanthipeptides: AQB43_RS08320_lanthipeptideNZ_CFVJ01000005.1 Lanthipeptides: AP598_RS03265_lanthipeptideNZ_CGGJ01000006.1 Lanthipeptides: AP607_RS03205_lanthipeptideNZ_CHVQ01000007.1 Lanthipeptides: AQF85_RS04285_lanthipeptideNZ_CJZM01000008.1 Lanthipeptides: AEE29_RS04155_lanthipeptideNZ_CLHL01000007.1 Lanthipeptides: AE723_RS05750_lanthipeptideNZ_CMIW01000004.1 Lanthipeptides: AD046_RS04075_lanthipeptideNZ_CMKL01000017.1 Lanthipeptides: AD734_RS09110_lanthipeptideNZ_CP035244.1 Lanthipeptides: EQH36_RS09105_lanthipeptideNZ_CP035253.1 Lanthipeptides: EQH27_RS09740_lanthipeptideNZ_CP082820.1 Lanthipeptides: K8B76_RS08865_lanthipeptideNZ_CPPE01000023.1 Lanthipeptides: AD654_RS06875_lanthipeptideNZ_CPRX01000013.1 Lanthipeptides: AEE77_RS05820_lanthipeptideNZ_CPTT01000011.1 Lanthipeptides: AEH42_RS06000_lanthipeptideNZ_CRAW01000006.1 Lanthipeptides: AK725_RS04395_lanthipeptideNZ_CRXO01000010.1 Lanthipeptides: AKU38_RS05260_lanthipeptideNZ_FCRW01000008.1 Lanthipeptides: A1N73_RS07425_lanthipeptideNZ_FDDE01000015.1 Lanthipeptides: A1A23_RS09705_lanthipeptideNZ_FDFR01000008.1 Lanthipeptides: A1O50_RS09320_lanthipeptideNZ_FDGF01000009.1 Lanthipeptides: A0899_RS06595_lanthipeptideNZ_FDQP01000009.1 Lanthipeptides: A1S42_RS08050_lanthipeptideNZ_FECM01000008.1 Lanthipeptides: A1930_RS06475_lanthipeptideNZ_FEEQ01000001.1 Lanthipeptides: A1T31_RS01145_lanthipeptideNZ_FEOS01000003.1 Lanthipeptides: A1178_RS03085_lanthipeptideNZ_FFTU01000009.1 Lanthipeptides: A1K37_RS06335_lanthipeptideNZ_FHJP02000011.1 Lanthipeptides: A1O79_RS07375_lanthipeptideNZ_FHRS02000028.1 Lanthipeptides: A1898_RS09820_lanthipeptideNZ_FIXQ01000010.1 Lanthipeptides: AZ721_RS04790_lanthipeptideNZ_FZDX01000018.1 Lanthipeptides: CFW91_RS09480_lanthipeptideNZ_FZEI01000008.1 Lanthipeptides: CFW58_RS06410_lanthipeptideNZ_JACVHZ010000010.1 Lanthipeptides: ICJ99_RS03880_lanthipeptideNZ_JAGFAE010000038.1 Lanthipeptides: J5E60_RS09005_lanthipeptideNZ_JALDUX010000010.1 Lanthipeptides: M1F92_RS09535_lanthipeptideNZ_JAMYJM010000002.1 Lanthipeptides: NKE69_RS04885_lanthipeptideNZ_LR216014.1 Lanthipeptides: E0F05_RS09385_lanthipeptideNZ_LR216016.1 Lanthipeptides: E0F10_RS10160_lanthipeptideNZ_LR216019.1 Lanthipeptides: E0E94_RS09635_lanthipeptideNZ_LR216027.1 Lanthipeptides: E0E81_RS09205_lanthipeptideNZ_LR216049.1 Lanthipeptides: E0E96_RS09540_lanthipeptideNZ_LR216064.1 Lanthipeptides: E0F31_RS09525_lanthipeptideNZ_LR536843.1 Lanthipeptides: E0F34_RS09600_lanthipeptideNZ_NANQ01000003.1 Lanthipeptides: B5K28_RS01935_lanthipeptide

Lanthipeptides: SP_RS09795_lanthipeptide

1

TDGADPRSTIICSATLSFIASYLGSAQTRCGKDNKKK

37

TDGADPRSTIICSATLSFIASYLGSAQTRCGKDNKKK

1

TDGADPRSTIICSATLSFIASYLGSAQTRCGKDNKKK

37

97.3%

NZ_MRXY01000010.1:

Lanthipeptides: BTU63_RS06305_lanthipeptide

1

TDGADPRSTIICSATLSFIASYLGSAQTRCGKDNKKK

37

TDGADPRS+IICSATLSFIASYLGSAQTRCGKDNKKK

1

TDGADPRSSIICSATLSFIASYLGSAQTRCGKDNKKK

37

97.3%

NZ_NAOJ01000022.1:

Lanthipeptides: B5K31_RS08015_lanthipeptide

1

TDGADPRSTIICSATLSFIASYLGSAQTRCGKDNKKK

37

TDGADPRST ICSATLSFIASYLGSAQTRCGKDNKKK

1

TDGADPRSTTICSATLSFIASYLGSAQTRCGKDNKKK

37

with 20 more sequence matches

Only the first 10 are displayed here.

70.3%

NZ_CP026035.1:

Lanthipeptides: C2H96_RS00310_lanthipeptide

4

ADPRSTIICSATLSFIASYLGSAQTRCGKDNKK

36

AD RST ICSA +SFIA+YLGSA T CGKDNKK

5

ADVRSTPICSAGISFIATYLGSAATNCGKDNKK

37

59.5%

NZ_CP094446.1:

Lanthipeptides: L3476_RS23820_lanthipeptide

2

DGADP--RSTIICSATLSFIASYLGSAQTRCGKDNKK

36

DG D RST+IC SFI SYL SA +CGK NKK

1

DGMDVEVRSTLICGVGASFIGSYLASAAFKCGKKNKK

37

56.8%

NZ_FNYB01000021.1:

Lanthipeptides: BMZ34_RS24360_lanthipeptide

3

GADPRSTIICSATLSFIASYLGSAQTRCGKDNKKK

37

G DPR+T SF+ASY+ SAQ RCGKDNK K

2

GVDPRTTP-SPLLASFVASYIASAQYRCGKDNKGK

35

56.8%

NZ_JACSNF010000005.1and 1 other:

NZ_LMPR01000013.1 Lanthipeptides: ASF99_RS16385_lanthipeptide

Lanthipeptides: KNQ12_RS14670_lanthipeptide

4

ADPRSTIICSATLSFIASYLGSAQTRCGKDNKK

36

D RS+++CSA LSF+ SYL SA +CGKDNKK

4

VDVRSSLVCSALLSFVGSYLASAGLKCGKDNKK

36

56.8%

NZ_KB976303.1:

Lanthipeptides: IGY_RS26050_lanthipeptide

3

GADPRSTIICSATLSFIASYLGSAQTRCGKDNKKK

37

G DPR+T SF+ASY+ SAQ RCGKDNK K

2

GVDPRTTP-SPLLASFVASYIASAQFRCGKDNKGK

35

55.3%

NZ_LWAG01000079.1:

Lanthipeptides: A4R27_RS25235_lanthipeptide

4

ADPRSTIICSATLSFIASYLGSAQTRCGKDNKKK

37

A+ RST+IC A +S I SYL SA +CGKDNK K

5

AEARSTLICGAGISLIGSYLASAAFKCGKDNKGK

38

54.1%

NZ_FNYB01000021.1:

Lanthipeptides: BMZ34_RS24355_lanthipeptide

3

GADPRSTIICSATLSFIASYLGSAQTRCGKDNKKK

37

G DPR+T SF+ASY+ SA+ RCGKDNK K

2

GVDPRTTP-SPLLASFVASYIASAEFRCGKDNKGK

35

51.4%

NZ_LN884299.1:

Lanthipeptides: BN2762_RS08665_lanthipeptide

4

ADPRSTIICSATLSFIASYLGSAQTRCGKDNK

35

A+ RST++C +SF+ASYL SA +CGKDNK

5

AEVRSTLLCGMGISFVASYLASAAFKCGKDNK

36

51.4%

NZ_NVMQ01000017.1:

Lanthipeptides: CON32_RS17790_lanthipeptide

3

GADPRSTIICSATLSFIASYLGSAQTRCGKDNKKK

37

G DPR+T SF+ASY+ SA+ +CGKDNK K

2

GVDPRTTP-SPLLASFVASYIASAEFKCGKDNKGK

35

48.6%

NZ_KN125582.1:

Lanthipeptides: DJ91_RS27545_lanthipeptide

3

GADPRSTIICSATLSFIASYLGSAQTRCGKDNK

35

G PR+T + SF+ASY+ SA+ RCGKDNK

2

GVTPRTTPATTLLASFVASYIASAEFRCGKDNK

34

A1898_RS09825

Leader:

MTNFNSNEKFCGKSLKSLSADEMSLIYGA

Core:

SDGAEPRWTPTPIILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

Core with dehydrations:

DhaDGAEPRWDhbPDhbPIILKDhaAAADhaDhaKVCysIDhaAAVDhaGIGGLVDhaYNNDCysLG

antiSMASH-DB 4.0 matches for A1898_RS09825

100.0%

NC_003028.3and 39 others:

NC_003098.1 Lanthipeptides: SPR_RS08860_lanthipeptideNC_011900.1 Lanthipeptides: SPN23F_RS10045_lanthipeptideNC_012466.1 Lanthipeptides: SPJ_RS09630_lanthipeptideNZ_CFDV01000030.1 Lanthipeptides: AQB43_RS08315_lanthipeptideNZ_CFVJ01000005.1 Lanthipeptides: AP598_RS03270_lanthipeptideNZ_CGGJ01000006.1 Lanthipeptides: AP607_RS03210_lanthipeptideNZ_CHVQ01000007.1 Lanthipeptides: AQF85_RS04280_lanthipeptideNZ_CJZM01000008.1 Lanthipeptides: AEE29_RS04150_lanthipeptideNZ_CLHL01000007.1 Lanthipeptides: AE723_RS05755_lanthipeptideNZ_CMIW01000004.1 Lanthipeptides: AD046_RS04070_lanthipeptideNZ_CP035253.1 Lanthipeptides: EQH27_RS09735_lanthipeptideNZ_CP082820.1 Lanthipeptides: K8B76_RS08860_lanthipeptideNZ_CPRX01000013.1 Lanthipeptides: AEE77_RS05815_lanthipeptideNZ_CPTT01000011.1 Lanthipeptides: AEH42_RS06005_lanthipeptideNZ_CRAW01000006.1 Lanthipeptides: AK725_RS04390_lanthipeptideNZ_CRXO01000010.1 Lanthipeptides: AKU38_RS05255_lanthipeptideNZ_FCRW01000008.1 Lanthipeptides: A1N73_RS07430_lanthipeptideNZ_FDDE01000015.1 Lanthipeptides: A1A23_RS09710_lanthipeptideNZ_FDFR01000008.1 Lanthipeptides: A1O50_RS09315_lanthipeptideNZ_FDGF01000009.1 Lanthipeptides: A0899_RS06590_lanthipeptideNZ_FDQP01000009.1 Lanthipeptides: A1S42_RS08045_lanthipeptideNZ_FECM01000008.1 Lanthipeptides: A1930_RS06470_lanthipeptideNZ_FEEQ01000001.1 Lanthipeptides: A1T31_RS01150_lanthipeptideNZ_FEOS01000003.1 Lanthipeptides: A1178_RS03090_lanthipeptideNZ_FFTU01000009.1 Lanthipeptides: A1K37_RS06340_lanthipeptideNZ_FHRS02000028.1 Lanthipeptides: A1898_RS09825_lanthipeptideNZ_FIXQ01000010.1 Lanthipeptides: AZ721_RS04795_lanthipeptideNZ_FZDX01000018.1 Lanthipeptides: CFW91_RS09485_lanthipeptideNZ_FZEI01000008.1 Lanthipeptides: CFW58_RS06405_lanthipeptideNZ_JACVHZ010000010.1 Lanthipeptides: ICJ99_RS03885_lanthipeptideNZ_JAGFAE010000038.1 Lanthipeptides: J5E60_RS09010_lanthipeptideNZ_LR216014.1 Lanthipeptides: E0F05_RS09380_lanthipeptideNZ_LR216019.1 Lanthipeptides: E0E94_RS09630_lanthipeptideNZ_LR216027.1 Lanthipeptides: E0E81_RS09200_lanthipeptideNZ_LR216049.1 Lanthipeptides: E0E96_RS09535_lanthipeptideNZ_LR216064.1 Lanthipeptides: E0F31_RS09520_lanthipeptideNZ_LR536843.1 Lanthipeptides: E0F34_RS09595_lanthipeptideNZ_NANQ01000003.1 Lanthipeptides: B5K28_RS01930_lanthipeptideNZ_NAOJ01000022.1 Lanthipeptides: B5K31_RS08010_lanthipeptide

Lanthipeptides: SP_RS09790_lanthipeptide

1

SDGAEPRWTPTPIILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

45

SDGAEPRWTPTPIILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

1

SDGAEPRWTPTPIILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

45

97.8%

NZ_CP035244.1and 3 others:

NZ_CPPE01000023.1 Lanthipeptides: AD654_RS06870_lanthipeptideNZ_FHJP02000011.1 Lanthipeptides: A1O79_RS07380_lanthipeptideNZ_LR216016.1 Lanthipeptides: E0F10_RS10155_lanthipeptide

Lanthipeptides: EQH36_RS09100_lanthipeptide

1

SDGAEPRWTPTPIILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

45

SDGAEPRWTPTPIILKSAAASSK+CISAAVSGIGGLVSYNNDCLG

1

SDGAEPRWTPTPIILKSAAASSKICISAAVSGIGGLVSYNNDCLG

45

95.6%

NZ_JALDUX010000010.1:

Lanthipeptides: M1F92_RS09530_lanthipeptide

1

SDGAEPRWTPTPIILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

45

SDGAEPRWTPTP+ILKSAAASSKVCISA VSGIGGLVSYNNDCLG

1

SDGAEPRWTPTPLILKSAAASSKVCISALVSGIGGLVSYNNDCLG

45

with 20 more sequence matches

Only the first 10 are displayed here.

91.1%

NZ_JAMYJM010000002.1:

Lanthipeptides: NKE69_RS04880_lanthipeptide

1

SDGAEPRWTPTPIILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

45

SDGAEPRWTPTP ILKSA ASSKVCISA VSGIGG+VSYNNDCLG

1

SDGAEPRWTPTPFILKSATASSKVCISAVVSGIGGIVSYNNDCLG

45

84.4%

NZ_MRXY01000010.1:

Lanthipeptides: BTU63_RS06300_lanthipeptide

1

SDGAEPRWTPTPIILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

45

SDGAEP WTPTP ILKSAA SSKVCISA +SGIGG+ SYNNDCLG

1

SDGAEPLWTPTPTILKSAARSSKVCISAIISGIGGIFSYNNDCLG

45

77.8%

NZ_CMKL01000017.1:

Lanthipeptides: AD734_RS09115_lanthipeptide

1

SDGAEPRWTPTPIILKSAAASSKVCISAAVSGIGG

35

SDGAEPRWTPTPIILKSAAASSKVCISAAVSGIGG

1

SDGAEPRWTPTPIILKSAAASSKVCISAAVSGIGG

35

54.3%

NZ_CP041405.1:

Lanthipeptides: FLT43_RS14400_lanthipeptide

5

EPRWTPT--PIILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

45

EPR TPT P I + SSKVC+S S IGG+ S+NNDCLG

4

EPRATPTIVPAISAAVRTSSKVCLSLVASAIGGIASHNNDCLG

46

54.3%

NZ_LN884299.1:

Lanthipeptides: BN2762_RS08660_lanthipeptide

5

EPRWTPTPI--ILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

45

+PR TPT + I++S A SSKVCISA S I G+VS N +CLG

4

DPRATPTIVASIIRSVAQSSKVCISAVGSAISGIVSNNKNCLG

46

53.3%

NZ_JACSPZ010000014.1:

Lanthipeptides: H9635_RS18390_lanthipeptide

5

EPRWTPTPIILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

45

EP TP IL +A SSK C+ A+S I GLVSYN DCLG

5

EPHTTP---ILSAATKSSKKCL-GAISAISGLVSYNKDCLG

41

51.1%

NZ_LWAG01000079.1:

Lanthipeptides: A4R27_RS25230_lanthipeptide

5

EPRWTPTPIILKSAAASS-KVCISAAVSGIGGLVSYNNDCLG

45

+PRWTP ++AA S K+CISA S IGG+VSYN +C G

4

DPRWTPIASAAINSAARSSKICISAVGSAIGGIVSYNKNCAG

45

48.9%

NZ_CP094446.1:

Lanthipeptides: L3476_RS23825_lanthipeptide

5

EPRWTPTPIILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

45

EPR TP I+ + SSK CISA S I G++S+N DCLG

4

EPRGTPATIV-SAVTRSSKPCISAIGSAISGIISHNKDCLG

43

48.9%

NZ_KB976303.1and 1 other:

NZ_KB976303.1 Lanthipeptides: IGY_RS26035_lanthipeptide

Lanthipeptides: IGY_RS26045_lanthipeptide

3

GAEPRWTPTPIILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

45

G + R PT I++ + ASSK C+S VS I GL+SYN DC+G

2

GVDTRTHPTVIVV--SRASSKACMSG-VSAISGLLSYNKDCIG

41

46.7%

NZ_CP026035.1:

Lanthipeptides: C2H96_RS00305_lanthipeptide

4

AEPRWTP-TPIILKSAAASSKVCISAAVSGIGGLVSYNNDCLG

45

A+PRWTP +L + S+++CIS S I G+VS+N DCLG

3

ADPRWTPAVSAVLSAVGRSTRLCISGIGSAISGIVSHNKDCLG

45

MIBiG 4.0 matches for A1898_RS09825

8.9%

BGC0000582.4 (ADR72962.1):

Linaridin: cypemycin

11

TPIILKSAAASSKVCI

26

TP + + S +C+

5

TPTVAQFVIQGSTICL

20

allorf_00109_00216

Leader:

MTISLSRSVRCETKKTPAM

Core:

RVCVEGYTKKTPNAIQ

Core with dehydrations:

RVCysVEGYDhbKKDhbPNAIQ

antiSMASH-DB 4.0 matches for allorf_00109_00216

100.0%

NC_003028.3and 9 others:

NC_003098.1 Lanthipeptides: allorf_1743556_1743663_lanthipeptideNC_012466.1 Lanthipeptides: allorf_1823226_1823333_lanthipeptideNZ_CFVJ01000005.1 Lanthipeptides: allorf_65899_66006_lanthipeptideNZ_CP082820.1 Lanthipeptides: allorf_1783059_1783166_lanthipeptideNZ_FDGF01000009.1 Lanthipeptides: allorf_46146_46253_lanthipeptideNZ_FEOS01000003.1 Lanthipeptides: allorf_046199_046306_lanthipeptideNZ_FHRS02000028.1 Lanthipeptides: allorf_00109_00216_lanthipeptideNZ_JAGFAE010000038.1 Lanthipeptides: allorf_46811_46918_lanthipeptideNZ_LR216049.1 Lanthipeptides: allorf_1766843_1766950_lanthipeptide

Lanthipeptides: allorf_1861890_1861997_lanthipeptide

1

RVCVEGYTKKTPNAIQ

16

RVCVEGYTKKTPNAIQ

1

RVCVEGYTKKTPNAIQ

16

38.1%

NC_012470.1and 1 other:

NZ_CP078012.1 Lanthipeptides: allorf_1992325_1992417_lanthipeptide

Lanthipeptides: allorf_0874216_0874308_lanthipeptide

7

YTKKTPNAIQ

16

Y KKTPNA+Q

5

YYKKTPNALQ

14

33.3%

NZ_CP031443.1and 4 others:

NZ_FWZD01000067.1 Lassopeptides: BACERE00177_RS21400_lassopeptideNZ_NTYE01000016.1 Lassopeptides: CN490_RS29030_lassopeptideNZ_NUEY01000038.1 Lassopeptides: CN888_RS28205_lassopeptideNZ_QOSD01000019.1 Lassopeptides: DN410_RS14275_lassopeptide

Lassopeptides: MLA2C4_RS19250_lassopeptide

6

GYTKKTPNAIQ

16

G KTP+AIQ

1

GPGHKTPDAIQ

11

with 4 more sequence matches

28.6%

NZ_CAKJTI010000013.1and 1 other:

NZ_JACYOF010000019.1 Lassopeptides: IGI01_RS27610_lassopeptide

Lassopeptides: LRP84_RS13300_lassopeptide

6

GYTKKTPNAIQ

16

G KTP+A+Q

1

GPGHKTPDAVQ

11

28.6%

NZ_JALJRJ010000031.1:

Lassopeptides: OC439_RS28220_lassopeptide

3

CVEGYTKKTPNAI

15

C E Y + P AI

7

CRESYVTQKPRAI

19

28.6%

NZ_QQAY01000002.1:

Lassopeptides: DFR59_RS05045_lassopeptide

6

GYTKKTPNAIQ

16

G K TP+A+Q

1

GPGKATPDAVQ

11

23.8%

NZ_CM000754.1and 19 others:

NZ_CP020723.1 Lassopeptides: B7P25_RS28625_lassopeptideNZ_CP023179.1 Lassopeptides: CK938_RS28520_lassopeptideNZ_CP032365.1 Lassopeptides: D4A37_RS18780_lassopeptideNZ_CP041063.1 Lassopeptides: FJM75_RS10710_lassopeptideNZ_CP085399.1 Lassopeptides: LIS81_RS18060_lassopeptideNZ_FMBE01000013.1 Lassopeptides: CCY88_RS31005_lassopeptideNZ_FMJI01000046.1 Lassopeptides: CCY61_RS30520_lassopeptideNZ_FMZR01000002.1 Lassopeptides: BLS53_RS31385_lassopeptideNZ_FTLZ01000002.1 Lassopeptides: BW973_RS28715_lassopeptideNZ_JAIEZS010000055.1 Lassopeptides: K0820_RS18465_lassopeptideNZ_JH791975.1 Lassopeptides: IEI_RS31960_lassopeptideNZ_JH792165.1 Lassopeptides: IIO_RS35460_lassopeptideNZ_JYPF01000002.1 Lassopeptides: TU50_RS30650_lassopeptideNZ_NUFG01000001.1 Lassopeptides: CN694_RS29875_lassopeptideNZ_NURJ01000008.1 Lassopeptides: COE89_RS29040_lassopeptideNZ_PIYQ01000023.1 Lassopeptides: CW365_RS28935_lassopeptideNZ_QOSC01000009.1 Lassopeptides: DN392_RS14315_lassopeptideNZ_VDNI01000012.1 Lassopeptides: FSV62_RS19525_lassopeptideNZ_WBPF01000005.1 Lassopeptides: F8162_RS06315_lassopeptide

Lassopeptides: BTHUR0009_RS30905_lassopeptide

10

KTPNAIQ

16

KTP+A+Q

5

KTPDAVQ

11

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Transcription Factor Binding Sites

Binding sites found:

ColR

Description: Phenol-responsive regulator
Species: Pseudomonas putida KT2440
Score: 24.81 out of 30.25

Confidence: medium

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 23.52 out of 26.06

Confidence: medium

MogR

Description: Repressor of flagellar motility genes
Species: Listeria monocytogenes EGD-e
Score: 23.70 out of 26.06

Confidence: medium

Additional weak hits (4):

BldD

Description: Development and antibiotic global regulator
Species: Streptomyces coelicolor
Score: 18.41 out of 23.43

Confidence: weak

HipB

Description: Bacterial antitoxin HipB
Species: Escherichia coli BL21(DE3)
Score: 22.23 out of 33.73

Confidence: weak

BldD

Description: Development and antibiotic global regulator
Species: Streptomyces coelicolor
Score: 19.16 out of 23.43

Confidence: weak

VqsM

Description: Regulator of quorum-sensing signalling systems
Species: Pseudomonas aeruginosa PAO1
Score: 16.07 out of 20.47

Confidence: weak

Lanthipeptides

TFBS Finder

Core peptide predictions

A1898_RS09820 - Class II

Cleavage pHMM score: -1.30

RODEO score: 0

Monoisotopic mass: 3741.0 Da

Molecular weight: 3743.2 Da

Number of bridges: 2

Alternative weights: (assuming N unmodified Ser/Thr residues); 3761.2 Da N = 1; 3779.2 Da N = 2; 3797.3 Da N = 3; 3815.3 Da N = 4; 3833.3 Da N = 5; 3851.3 Da N = 6; 3869.3 Da N = 7

A1898_RS09825 - Class II

Cleavage pHMM score: -0.40

RODEO score: 0

Monoisotopic mass: 4313.2 Da

Molecular weight: 4315.8 Da

Number of bridges: 2

Alternative weights: (assuming N unmodified Ser/Thr residues); 4333.9 Da N = 1; 4351.9 Da N = 2; 4369.9 Da N = 3; 4387.9 Da N = 4; 4405.9 Da N = 5; 4424.0 Da N = 6; 4442.0 Da N = 7

allorf_00109_00216 - Class II

Cleavage pHMM score: -6.50

RODEO score: 0

Monoisotopic mass: 1769.9 Da

Molecular weight: 1771.0 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 1789.1 Da N = 1

TFBS definitions

Regulator	Description
ColR	Phenol-responsive regulator
MogR	Repressor of flagellar motility genes