GCF_029338335.1 - 8 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP119796.1 (Halomontanus rarus)

Region	Type	From	To
Region 1.1	terpene-precursor	126,862	147,920
Region 1.2	terpene	172,043	192,444
Region 1.3	terpene	500,096	521,058
Region 1.4	terpene-precursor	849,957	870,799
Region 1.5	terpene	2,388,540	2,409,592
Region 1.6	terpene-precursor	2,699,174	2,720,238
Region 1.7	lassopeptide	3,225,204	3,253,680
Region 1.8	RiPP-like	3,575,892	3,587,664

Region	Type	From	To	Most similar known cluster
Region 1.1	terpene-precursor	126,862	147,920
Region 1.2	terpene	172,043	192,444
Region 1.3	terpene	500,096	521,058
Region 1.4	terpene-precursor	849,957	870,799
Region 1.5	terpene	2,388,540	2,409,592
Region 1.6	terpene-precursor	2,699,174	2,720,238
Region 1.7	lassopeptide	3,225,204	3,253,680
Region 1.8	RiPP-like	3,575,892	3,587,664

No secondary metabolite regions were found in these records:: NZ_CP119797.1 (Halomontanus rarus); NZ_CP119798.1 (Halomontanus rarus); NZ_CP119799.1 (Halomontanus rarus); NZ_CP119800.1 (Halomontanus rarus); NZ_CP119801.1 (Halomontanus rarus)

Compact view

NZ_CP119796.1 - Region 1 - terpene-precursor

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Location: 126,862 - 147,920 nt. (total: 21,059 nt) Show pHMM detection rules used

terpene-precursor: (PT_FPPS_like and not PT_HPP)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: dehydrogenase

P1Y19_RS00665: short-chain dehydrogenase/reductase SDR

smcogs: SMCOG1001: short-chain dehydrogenase/reductase SDR

Ligases: synthetase

P1Y19_RS00700: Polyprenyl synthetase

smcogs: SMCOG1182: Polyprenyl synthetase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000677.5	0.37	terpene	cyclooctatin	Streptomyces melanosporofaciens
BGC0002309.2	0.36	terpene	cattleyene	Streptomyces cattleya NRRL 8057 = DSM 46488
BGC0000639.3	0.34	terpene	carotenoid	Enterobacteriaceae bacterium DC260
BGC0001911.3	0.34	terpene	raimonol	Streptomyces anulatus
BGC0000642.3	0.33	terpene	carotenoid	Enterobacteriaceae bacterium DC413
BGC0000286.3	0.33	PKS	viguiepinol	Streptomyces sp. KO-3988
BGC0001910.4	0.32	terpene	cyslabdan A, cyslabdan B, cyslabdan C	Streptomyces cyslabdanicus
BGC0000643.3	0.32	terpene	carotenoid	Brevundimonas vesicularis
BGC0000648.3	0.31	terpene	carotenoid	Myxococcus xanthus
BGC0000644.3	0.31	terpene	carotenoid	Dietzia sp. CQ4

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000677.5	0.37	terpene	cyclooctatin	Streptomyces melanosporofaciens
BGC0002309.2	0.36	terpene	cattleyene	Streptomyces cattleya NRRL 8057 = DSM 46488
BGC0000639.3	0.34	terpene	carotenoid	Enterobacteriaceae bacterium DC260
BGC0001911.3	0.34	terpene	raimonol	Streptomyces anulatus
BGC0000642.3	0.33	terpene	carotenoid	Enterobacteriaceae bacterium DC413
BGC0000286.3	0.33	PKS	viguiepinol	Streptomyces sp. KO-3988
BGC0001910.4	0.32	terpene	cyslabdan A, cyslabdan B, cyslabdan C	Streptomyces cyslabdanicus
BGC0000643.3	0.32	terpene	carotenoid	Brevundimonas vesicularis
BGC0000648.3	0.31	terpene	carotenoid	Myxococcus xanthus
BGC0000644.3	0.31	terpene	carotenoid	Dietzia sp. CQ4

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Product name	Chain length	Initial cyclisations	Functional groups
sesquiterpene precursor	FPP	C15	acyclic	PP
diterpene precursor	GGPP	C20	acyclic	PP
sesterterpene precursor	GFPP	C25	acyclic	PP
triterpene precursor	HPP	C30	acyclic	PP

Genes with terpene domains:

P1Y19_RS00700: PT_FPPS_like

Domain 1 (38 - 350): Prenyltransferase; Farnesyl diphosphate synthase like

Subtype: unknown

Reactions:: IPP, DMAPP → FPP; IPP, DMAPP → GGPP; IPP, DMAPP → GFPP; IPP, DMAPP → HPP

Terpene

Glossary

Acronym	Full name
DMAPP	Dimethylallyl diphosphate
FPP	Farnesyl diphosphate
GFPP	Geranylfarnesyl diphosphate
GGPP	Geranylgeranyl diphosphate
HPP	Hexaprenyl diphosphate
IPP	Isopentenyl diphosphate
PP	Diphosphate

NZ_CP119796.1 - Region 2 - terpene

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Location: 172,043 - 192,444 nt. (total: 20,402 nt) Show pHMM detection rules used

terpene: (PT_phytoene_like or phytoene_synt or Lycopene_cycl or Lycopene_cycl_fung or T1TS or T1TS_KS or T2TS or TS_UbiA or TS_Pyr4)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Isomerases: isomerase

P1Y19_RS00910: isochorismate synthase

smcogs: SMCOG1018: isochorismate synthase

Ligases: synthase

P1Y19_RS00905: carbamoyl phosphate synthase small subunit

smcogs: SMCOG1249: carbamoyl phosphate synthase small subunit

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002031.3	0.34	other (other)	kitasetaline	Kitasatospora setae KM-6054
BGC0001903.3	0.30	other (other)	neocarazostatin A	Streptomyces sp. MA37
BGC0000922.5	0.30	PKS	2-heptyl-3-hydroxy-4-quinolone, 2,4-Quinolinediol, 2-heptylquinolin-4(1H)-one	Pseudomonas aeruginosa PAO1
BGC0001778.5	0.29	other (other)	showdomycin	Streptomyces showdoensis
BGC0001529.5	0.29	other (other)	benzastatin J, 7-hydroxyl benzastatin B, 7-hydroxyl O-demethylbenzastatin A, JBIR-67, 7-hydroxyl benzastatin F, 7-hydroxyl O-demethylbenzastatin D, O-demethylvirantmycin, 7-hydroxyl benzastatin D, virantmycin, benzastatin K, methylbenzastatin K	Streptomyces sp. RI18
BGC0002439.3	0.29	other (other)	diastaphenazine, izumiphenazine C	Streptomyces diastaticus
BGC0002473.3	0.28	NRPS	propanochelin, butanochelin, pentanochelin	Acinetobacter bouvetii DSM 14964 = CIP 107468
BGC0000401.5	0.28	NRPS	paenibactin	Paenibacillus elgii B69
BGC0002324.3	0.27	NRPS, PKS	myxochelin B, myxochelin N, myxochelin O, myxochelin P, myxochelin Q, myxochelin A	Archangium violaceum
BGC0000309.5	0.26	NRPS	bacillibactin	Bacillus subtilis subsp. subtilis str. 168

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002031.3	0.34	other (other)	kitasetaline	Kitasatospora setae KM-6054
BGC0001903.3	0.30	other (other)	neocarazostatin A	Streptomyces sp. MA37
BGC0000922.5	0.30	PKS	2-heptyl-3-hydroxy-4-quinolone, 2,4-Quinolinediol, 2-heptylquinolin-4(1H)-one	Pseudomonas aeruginosa PAO1
BGC0001778.5	0.29	other (other)	showdomycin	Streptomyces showdoensis
BGC0001529.5	0.29	other (other)	benzastatin J, 7-hydroxyl benzastatin B, 7-hydroxyl O-demethylbenzastatin A, JBIR-67, 7-hydroxyl benzastatin F, 7-hydroxyl O-demethylbenzastatin D, O-demethylvirantmycin, 7-hydroxyl benzastatin D, virantmycin, benzastatin K, methylbenzastatin K	Streptomyces sp. RI18
BGC0002439.3	0.29	other (other)	diastaphenazine, izumiphenazine C	Streptomyces diastaticus
BGC0002473.3	0.28	NRPS	propanochelin, butanochelin, pentanochelin	Acinetobacter bouvetii DSM 14964 = CIP 107468
BGC0000401.5	0.28	NRPS	paenibactin	Paenibacillus elgii B69
BGC0002324.3	0.27	NRPS, PKS	myxochelin B, myxochelin N, myxochelin O, myxochelin P, myxochelin Q, myxochelin A	Archangium violaceum
BGC0000309.5	0.26	NRPS	bacillibactin	Bacillus subtilis subsp. subtilis str. 168

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Subclass	Product name	Chain length	Initial cyclisations	Functional groups
tetraterpene	C40 carotenoid		C40	unknown	unknown

Genes with terpene domains:

P1Y19_RS00945: Lycopene_cycl

Domain 1 (10 - 88): Lycopene cyclase

Reactions:: C40_carotenoid → C40_carotenoid

Terpene

Glossary

No acronyms to display

NZ_CP119796.1 - Region 3 - terpene

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Location: 500,096 - 521,058 nt. (total: 20,963 nt) Show pHMM detection rules used

terpene: (PT_phytoene_like or phytoene_synt or Lycopene_cycl or Lycopene_cycl_fung or T1TS or T1TS_KS or T2TS or TS_UbiA or TS_Pyr4)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: dehydrogenase

P1Y19_RS02570: short-chain dehydrogenase/reductase SDR

smcogs: SMCOG1001: short-chain dehydrogenase/reductase SDR

P1Y19_RS02575: dehydrogenase

smcogs: SMCOG1222: dehydrogenase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000656.5	0.47	terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000664.5	0.46	terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000637.3	0.45	terpene	carotenoid	Corynebacterium glutamicum
BGC0000644.3	0.45	terpene	carotenoid	Dietzia sp. CQ4
BGC0000633.3	0.44	terpene	carotenoid	Streptomyces avermitilis
BGC0001456.3	0.44	terpene	isorenieratene	Streptomyces argillaceus
BGC0000645.3	0.44	terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000650.3	0.43	terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0001227.3	0.42	terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000648.3	0.42	terpene	carotenoid	Myxococcus xanthus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000656.5	0.47	terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000664.5	0.46	terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000637.3	0.45	terpene	carotenoid	Corynebacterium glutamicum
BGC0000644.3	0.45	terpene	carotenoid	Dietzia sp. CQ4
BGC0000633.3	0.44	terpene	carotenoid	Streptomyces avermitilis
BGC0001456.3	0.44	terpene	isorenieratene	Streptomyces argillaceus
BGC0000645.3	0.44	terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000650.3	0.43	terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0001227.3	0.42	terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000648.3	0.42	terpene	carotenoid	Myxococcus xanthus

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Subclass	Product name	Chain length	Initial cyclisations	Functional groups
triterpene		squalene	C30	acyclic	none
triterpene		PSPP	C30	acyclic	PP
triterpene	C30 carotenoid	diapophytoene	C30	acyclic	none
tetraterpene	C40 carotenoid	phytoene	C40	acyclic	none
triterpene		hydroxysqualene	C30	acyclic	OH

Genes with terpene domains:

P1Y19_RS02590: PT_phytoene_like

Domain 1 (9 - 284): Prenyltransferase; Phytoene synthase like

Subtype: unknown

Reactions:: FPP → squalene; FPP → PSPP; FPP → diapophytoene; GGPP → phytoene; PSPP → hydroxysqualene

Terpene

Glossary

Acronym	Full name
FPP	Farnesyl diphosphate
GGPP	Geranylgeranyl diphosphate
PP	Diphosphate
PSPP	Presqualene diphosphate

NZ_CP119796.1 - Region 4 - terpene-precursor

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Location: 849,957 - 870,799 nt. (total: 20,843 nt) Show pHMM detection rules used

terpene-precursor: (PT_FPPS_like and not PT_HPP)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: dehydrogenase

P1Y19_RS04225: short-chain dehydrogenase/reductase SDR

smcogs: SMCOG1001: short-chain dehydrogenase/reductase SDR

Transferases: methyltransferase

P1Y19_RS04300: methyltransferase

smcogs: SMCOG1089: methyltransferase

Ligases: synthetase

P1Y19_RS04255: Polyprenyl synthetase

smcogs: SMCOG1182: Polyprenyl synthetase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002276.2	0.53	NRPS	choline	Aspergillus nidulans FGSC A4
BGC0002162.3	0.50	terpene	sesterfisherol, sesterfisheric acid, compound 6, compound 7a, compound 5, compound 8	Aspergillus fischeri NRRL 181
BGC0002610.3	0.50	terpene	stellatic acid	Aspergillus stellatus
BGC0000244.4	0.48	PKS	nonactin, monactin, dinactin, trinactin, tetranactin	Streptomyces griseus subsp. griseus
BGC0002397.2	0.45	terpene	astallatene	Arabidopsis thaliana
BGC0002400.2	0.43	terpene	boleracene	Brassica oleracea var. oleracea
BGC0002219.2	0.39	terpene	(-)-(R)-nephthenol	Stereum hirsutum FP-91666 SS1
BGC0002398.2	0.37	terpene	(-)-ent-quiannulatene	Arabidopsis thaliana
BGC0000646.5	0.37	terpene	β-carotein	uncultured bacterium
BGC0000642.3	0.37	terpene	carotenoid	Enterobacteriaceae bacterium DC413

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002276.2	0.53	NRPS	choline	Aspergillus nidulans FGSC A4
BGC0002162.3	0.50	terpene	sesterfisherol, sesterfisheric acid, compound 6, compound 7a, compound 5, compound 8	Aspergillus fischeri NRRL 181
BGC0002610.3	0.50	terpene	stellatic acid	Aspergillus stellatus
BGC0000244.4	0.48	PKS	nonactin, monactin, dinactin, trinactin, tetranactin	Streptomyces griseus subsp. griseus
BGC0002397.2	0.45	terpene	astallatene	Arabidopsis thaliana
BGC0002400.2	0.43	terpene	boleracene	Brassica oleracea var. oleracea
BGC0002219.2	0.39	terpene	(-)-(R)-nephthenol	Stereum hirsutum FP-91666 SS1
BGC0002398.2	0.37	terpene	(-)-ent-quiannulatene	Arabidopsis thaliana
BGC0000646.5	0.37	terpene	β-carotein	uncultured bacterium
BGC0000642.3	0.37	terpene	carotenoid	Enterobacteriaceae bacterium DC413

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Product name	Chain length	Initial cyclisations	Functional groups
sesquiterpene precursor	FPP	C15	acyclic	PP
diterpene precursor	GGPP	C20	acyclic	PP
sesterterpene precursor	GFPP	C25	acyclic	PP
triterpene precursor	HPP	C30	acyclic	PP

Genes with terpene domains:

P1Y19_RS04255: PT_FPPS_like

Domain 1 (27 - 270): Prenyltransferase; Farnesyl diphosphate synthase like

Subtype: unknown

Reactions:: IPP, DMAPP → FPP; IPP, DMAPP → GGPP; IPP, DMAPP → GFPP; IPP, DMAPP → HPP

Terpene

Glossary

Acronym	Full name
DMAPP	Dimethylallyl diphosphate
FPP	Farnesyl diphosphate
GFPP	Geranylfarnesyl diphosphate
GGPP	Geranylgeranyl diphosphate
HPP	Hexaprenyl diphosphate
IPP	Isopentenyl diphosphate
PP	Diphosphate

NZ_CP119796.1 - Region 5 - terpene

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Location: 2,388,540 - 2,409,592 nt. (total: 21,053 nt) Show pHMM detection rules used

terpene: (PT_phytoene_like or phytoene_synt or Lycopene_cycl or Lycopene_cycl_fung or T1TS or T1TS_KS or T2TS or TS_UbiA or TS_Pyr4)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Oxidoreductases: dehydrogenase

P1Y19_RS11595: 3-hydroxybutyryl-CoA dehydrogenase

smcogs: SMCOG1095: 3-hydroxybutyryl-CoA dehydrogenase

Transferases: transferase

P1Y19_RS11560: acetyl-CoA carboxylase, carboxyl transferase,

smcogs: SMCOG1059: acetyl-CoA carboxylase, carboxyl transferase,

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000706.3	0.34	saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000147.5	0.31	PKS	soraphen A	Sorangium cellulosum
BGC0000122.5	0.30	PKS	phenylnannolone A, phenylnannolone B, phenylnannolone C	Nannocystis pusilla
BGC0000864.3	0.27	other (other)	eicosapentaenoic acid-like compound	Moritella marina ATCC 15381
BGC0000702.5	0.26	saccharide	kanamycin	Streptomyces kanamyceticus
BGC0002547.2	0.25	PKS	youssoufene A1, youssoufene B1, youssoufene B2, youssoufene B3, youssoufene B4	Streptomyces youssoufiensis
BGC0001941.3	0.25	PKS	Fulvuthiacene A, Fulvuthiacene B	Myxococcus fulvus
BGC0001034.5	0.25	NRPS, PKS	pellasoren, pellasoren B	Sorangium cellulosum
BGC0001095.5	0.25	NRPS	fengycin	Bacillus velezensis FZB42
BGC0000703.4	0.25	saccharide	kanamycin	Streptomyces kanamyceticus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000706.3	0.34	saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000147.5	0.31	PKS	soraphen A	Sorangium cellulosum
BGC0000122.5	0.30	PKS	phenylnannolone A, phenylnannolone B, phenylnannolone C	Nannocystis pusilla
BGC0000864.3	0.27	other (other)	eicosapentaenoic acid-like compound	Moritella marina ATCC 15381
BGC0000702.5	0.26	saccharide	kanamycin	Streptomyces kanamyceticus
BGC0002547.2	0.25	PKS	youssoufene A1, youssoufene B1, youssoufene B2, youssoufene B3, youssoufene B4	Streptomyces youssoufiensis
BGC0001941.3	0.25	PKS	Fulvuthiacene A, Fulvuthiacene B	Myxococcus fulvus
BGC0001034.5	0.25	NRPS, PKS	pellasoren, pellasoren B	Sorangium cellulosum
BGC0001095.5	0.25	NRPS	fengycin	Bacillus velezensis FZB42
BGC0000703.4	0.25	saccharide	kanamycin	Streptomyces kanamyceticus

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Subclass	Product name	Chain length	Initial cyclisations	Functional groups
triterpene		squalene	C30	acyclic	none
triterpene		PSPP	C30	acyclic	PP
triterpene	C30 carotenoid	diapophytoene	C30	acyclic	none
tetraterpene	C40 carotenoid	phytoene	C40	acyclic	none
triterpene		hydroxysqualene	C30	acyclic	OH

Genes with terpene domains:

P1Y19_RS11605: PT_phytoene_like

Domain 1 (25 - 334): Prenyltransferase; Phytoene synthase like

Subtype: unknown

Reactions:: FPP → squalene; FPP → PSPP; FPP → diapophytoene; GGPP → phytoene; PSPP → hydroxysqualene

Terpene

Glossary

Acronym	Full name
FPP	Farnesyl diphosphate
GGPP	Geranylgeranyl diphosphate
PP	Diphosphate
PSPP	Presqualene diphosphate

NZ_CP119796.1 - Region 6 - terpene-precursor

Download region GenBank file

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Location: 2,699,174 - 2,720,238 nt. (total: 21,065 nt) Show pHMM detection rules used

terpene-precursor: (PT_FPPS_like and not PT_HPP)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Terpene

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Hydrolases: dehalogenase

P1Y19_RS13150: haloalkane dehalogenase

smcogs: SMCOG1262: haloalkane dehalogenase

Ligases: ligase synthetase

P1Y19_RS13155: AMP-dependent synthetase and ligase

smcogs: SMCOG1002: AMP-dependent synthetase and ligase

P1Y19_RS13165: Polyprenyl synthetase

smcogs: SMCOG1182: Polyprenyl synthetase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002610.3	0.50	terpene	stellatic acid	Aspergillus stellatus
BGC0002736.2	0.50	terpene	preaspterpenacid I	Aspergillus terreus NIH2624
BGC0002162.3	0.50	terpene	sesterfisherol, sesterfisheric acid, compound 6, compound 7a, compound 5, compound 8	Aspergillus fischeri NRRL 181
BGC0002397.2	0.45	terpene	astallatene	Arabidopsis thaliana
BGC0002400.2	0.43	terpene	boleracene	Brassica oleracea var. oleracea
BGC0002700.2	0.41	ribosomal	bacinapeptin	Bacillus nakamurai
BGC0001528.4	0.40	terpene	betaestacin I, betaestacin II	Phoma betae
BGC0000486.4	0.40	ribosomal	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0001317.3	0.40	terpene	lupeol	Lotus japonicus
BGC0002111.3	0.38	ribosomal	andalusicin A, andalusicin B	Bacillus thuringiensis serovar andalousiensis NRRL B-23139

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002610.3	0.50	terpene	stellatic acid	Aspergillus stellatus
BGC0002736.2	0.50	terpene	preaspterpenacid I	Aspergillus terreus NIH2624
BGC0002162.3	0.50	terpene	sesterfisherol, sesterfisheric acid, compound 6, compound 7a, compound 5, compound 8	Aspergillus fischeri NRRL 181
BGC0002397.2	0.45	terpene	astallatene	Arabidopsis thaliana
BGC0002400.2	0.43	terpene	boleracene	Brassica oleracea var. oleracea
BGC0002700.2	0.41	ribosomal	bacinapeptin	Bacillus nakamurai
BGC0001528.4	0.40	terpene	betaestacin I, betaestacin II	Phoma betae
BGC0000486.4	0.40	ribosomal	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0001317.3	0.40	terpene	lupeol	Lotus japonicus
BGC0002111.3	0.38	ribosomal	andalusicin A, andalusicin B	Bacillus thuringiensis serovar andalousiensis NRRL B-23139

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Detailed terpene predictions

Product predictions:

Class	Product name	Chain length	Initial cyclisations	Functional groups
sesquiterpene precursor	FPP	C15	acyclic	PP
diterpene precursor	GGPP	C20	acyclic	PP
sesterterpene precursor	GFPP	C25	acyclic	PP
triterpene precursor	HPP	C30	acyclic	PP

Genes with terpene domains:

P1Y19_RS13165: PT_FPPS_like

Domain 1 (50 - 351): Prenyltransferase; Farnesyl diphosphate synthase like

Subtype: unknown

Reactions:: IPP, DMAPP → FPP; IPP, DMAPP → GGPP; IPP, DMAPP → GFPP; IPP, DMAPP → HPP

Terpene

Glossary

Acronym	Full name
DMAPP	Dimethylallyl diphosphate
FPP	Farnesyl diphosphate
GFPP	Geranylfarnesyl diphosphate
GGPP	Geranylgeranyl diphosphate
HPP	Hexaprenyl diphosphate
IPP	Isopentenyl diphosphate
PP	Diphosphate

NZ_CP119796.1 - Region 7 - lassopeptide

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Location: 3,225,204 - 3,253,680 nt. (total: 28,477 nt) Show pHMM detection rules used

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Lasso peptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

Transferases: glycosyltransferase

P1Y19_RS15475: glycosyl transferase group 1

smcogs: SMCOG1045: glycosyl transferase group 1

P1Y19_RS15485: glycosyl transferase group 1

smcogs: SMCOG1045: glycosyl transferase group 1

Hydrolases: hydrolase

P1Y19_RS15505: asparagine synthase (glutamine-hydrolyzing)

smcogs: SMCOG1177: asparagine synthase (glutamine-hydrolyzing)

P1Y19_RS15535: asparagine synthase (glutamine-hydrolyzing)

smcogs: SMCOG1177: asparagine synthase (glutamine-hydrolyzing)

Lyases: dehydratase

P1Y19_RS15550: NAD-dependent epimerase/dehydratase

smcogs: SMCOG1010: NAD-dependent epimerase/dehydratase

Ligases: synthase

P1Y19_RS15560: 1-deoxy-D-xylulose-5-phosphate synthase

smcogs: SMCOG1110: 1-deoxy-D-xylulose-5-phosphate synthase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001534.3	0.61	other (other)	branched-chain fatty acids	Streptomyces filamentosus
BGC0001535.3	0.55	other (other)	branched-chain fatty acids	Streptomyces filamentosus
BGC0001356.4	0.50	ribosomal	paeninodin	Paenibacillus dendritiformis C454
BGC0002825.2	0.50	ribosomal	nocapeptin A	Nocardia terpenica IFM 0406
BGC0000707.5	0.45	saccharide	kasugamycin	Streptomyces kasugaensis
BGC0000786.3	0.44	saccharide	O-antigen	Edwardsiella ictaluri 93-146
BGC0000777.3	0.43	saccharide	lipopolysaccharide	Escherichia coli
BGC0000846.5	0.43	other (other)	tabtoxin	Pseudomonas syringae
BGC0002306.2	0.43	ribosomal	freyrasin	Paenibacillus polymyxa ATCC 842
BGC0000885.3	0.43	other (other)	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001534.3	0.61	other (other)	branched-chain fatty acids	Streptomyces filamentosus
BGC0001535.3	0.55	other (other)	branched-chain fatty acids	Streptomyces filamentosus
BGC0001356.4	0.50	ribosomal	paeninodin	Paenibacillus dendritiformis C454
BGC0002825.2	0.50	ribosomal	nocapeptin A	Nocardia terpenica IFM 0406
BGC0000707.5	0.45	saccharide	kasugamycin	Streptomyces kasugaensis
BGC0000786.3	0.44	saccharide	O-antigen	Edwardsiella ictaluri 93-146
BGC0000777.3	0.43	saccharide	lipopolysaccharide	Escherichia coli
BGC0000846.5	0.43	other (other)	tabtoxin	Pseudomonas syringae
BGC0002306.2	0.43	ribosomal	freyrasin	Paenibacillus polymyxa ATCC 842
BGC0000885.3	0.43	other (other)	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

RREFinder

Core peptide predictions

No core peptides found.

RRE predictions

: RRE type: Stand_Alone_Lasso_RRE; Location: 12 - 93; Score: 87.9

NZ_CP119796.1 - Region 8 - RiPP-like

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Location: 3,575,892 - 3,587,664 nt. (total: 11,773 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

Tailoring

MIBiG comparison

KnownClusterBlast

SubClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Tailoring functions

No tailoring functions detected.

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001797.3	0.22	ribosomal	telomestatin	Streptomyces anulatus
BGC0000881.3	0.21	other (other)	toyocamycin	Streptomyces ahygroscopicus subsp. wuzhouensis
BGC0001808.5	0.21	other (other)	toyocamycin	Streptomyces diastatochromogenes

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001797.3	0.22	ribosomal	telomestatin	Streptomyces anulatus
BGC0000881.3	0.21	other (other)	toyocamycin	Streptomyces ahygroscopicus subsp. wuzhouensis
BGC0001808.5	0.21	other (other)	toyocamycin	Streptomyces diastatochromogenes

Similar known clusters from MIBiG 4.0

No significant matches found.

Similar subclusters

No significant matches found.