LOCUS       NC_011900              10288 bp    DNA     circular CON 11-FEB-2024
DEFINITION  Streptococcus pneumoniae ATCC 700669, complete sequence.
ACCESSION   NC_011900
VERSION     NC_011900.1
KEYWORDS    RefSeq; complete genome.
SOURCE      Streptococcus pneumoniae ATCC 700669
  ORGANISM  Streptococcus pneumoniae ATCC 700669
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1
  AUTHORS   Croucher,N.J., Walker,D., Romero,P., Lennard,N., Paterson,G.K.,
            Bason,N.C., Mitchell,A.M., Quail,M.A., Andrew,P.W., Parkhill,J.,
            Bentley,S.D. and Mitchell,T.J.
  TITLE     Role of conjugative elements in the evolution of the
            multidrug-resistant pandemic clone Streptococcus pneumoniaeSpain23F
            ST81
  JOURNAL   J Bacteriol 191 (5), 1480-1489 (2009)
   PUBMED   19114491
REFERENCE   2  (bases 1 to 2221315)
  AUTHORS   Croucher,N.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-SEP-2008) Croucher N.J., Pathogen Genomics, Wellcome
            Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton,
            Cambridge, Cambridgeshire, CB10 1SA, UNITED KINGDOM
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 02/11/2024 00:47:58
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,268
            CDSs (total)                      :: 2,195
            Genes (coding)                    :: 2,039
            CDSs (with protein)               :: 2,039
            Genes (RNA)                       :: 73
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 156
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 82 of 156
            Pseudo Genes (incomplete)         :: 70 of 156
            Pseudo Genes (internal stop)      :: 58 of 156
            Pseudo Genes (multiple problems)  :: 45 of 156
            ##Genome-Annotation-Data-END##
            ##antiSMASH-Data-START##
            Version                           :: 8.dev-cf2fc5ee(changed)
            Run date                          :: 2025-09-13 07:23:20
            NOTE :: This is a single region extracted from a larger record!
            Orig. start                       :: 108348
            Orig. end                         :: 118636
            ##antiSMASH-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            FM211187.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     region          1..10288
                     /candidate_cluster_numbers="1"
                     /contig_edge="False"
                     /product="RiPP-like"
                     /region_number="2"
                     /rules="(strepbact or Antimicrobial14 or Bacteriocin_IId or
                     BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or
                     Lactococcin or Antimicrobial17 or Lactococcin_972 or
                     Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or
                     TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or
                     TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))"
                     /tool="antismash"
     cand_cluster    1..10288
                     /candidate_cluster_number="1"
                     /contig_edge="False"
                     /detection_rules="(strepbact or Antimicrobial14 or
                     Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or
                     Bacteriocin_IIi or Lactococcin or Antimicrobial17 or
                     Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin
                     or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or
                     TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or
                     TIGR03604))"
                     /kind="single"
                     /product="RiPP-like"
                     /protoclusters="1"
                     /tool="antismash"
     protocluster    1..10288
                     /aStool="rule-based-clusters"
                     /category="RiPP"
                     /contig_edge="False"
                     /core_location="[5000:5288](+)"
                     /cutoff="20000"
                     /detection_rule="(strepbact or Antimicrobial14 or
                     Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or
                     Bacteriocin_IIi or Lactococcin or Antimicrobial17 or
                     Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin
                     or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or
                     TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or
                     TIGR03604))"
                     /neighbourhood="5000"
                     /product="RiPP-like"
                     /protocluster_number="1"
                     /tool="antismash"
     proto_core      5001..5288
                     /aStool="rule-based-clusters"
                     /tool="antismash"
                     /cutoff="20000"
                     /detection_rule="(strepbact or Antimicrobial14 or
                     Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or
                     Bacteriocin_IIi or Lactococcin or Antimicrobial17 or
                     Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin
                     or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or
                     TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or
                     TIGR03604))"
                     /neighbourhood="5000"
                     /product="RiPP-like"
                     /protocluster_number="1"
     gene            complement(900..1112)
                     /locus_tag="SPN23F_RS13190"
                     /old_locus_tag="SPN23F01160"
     CDS             complement(900..1112)
                     /codon_start=1
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /locus_tag="SPN23F_RS13190"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /old_locus_tag="SPN23F01160"
                     /product="hypothetical protein"
                     /protein_id="WP_000693348.1"
                     /transl_table=11
                     /translation="MKIKEQTRKLAAGSSKHCFKVVDGTDEVSSKHCFKVVDGTDEVSS
                     KHCFEVVDRTDEVSNHIRQGDVDVV"
     gene            complement(1162..1794)
                     /locus_tag="SPN23F_RS00590"
                     /old_locus_tag="SPN23F01170"
                     /old_locus_tag="SPN23F_01170"
     CDS             complement(1162..1794)
                     /codon_start=1
                     /gene_functions="biosynthetic-additional
                     (rule-based-clusters) HAD_2"
                     /gene_functions="biosynthetic-additional (smcogs)
                     SMCOG1115: HAD-superfamily hydrolase, subfamily IA,
                     variant"
                     /gene_kind="biosynthetic-additional"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000200889.1"
                     /locus_tag="SPN23F_RS00590"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /old_locus_tag="SPN23F01170"
                     /old_locus_tag="SPN23F_01170"
                     /product="HAD family hydrolase"
                     /protein_id="WP_000200892.1"
                     /sec_met_domain="HAD_2 (E-value: 1.4e-37, bitscore: 126.5,
                     seeds: 50, tool: rule-based-clusters)"
                     /transl_table=11
                     /translation="MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRG
                     FMGPPLESSFATCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSYPLYI
                     TTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDT
                     KFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYFQ"
     gene            complement(1816..2688)
                     /gene="sdaAA"
                     /locus_tag="SPN23F_RS00595"
                     /old_locus_tag="SPN23F01180"
                     /old_locus_tag="SPN23F_01180"
     CDS             complement(1816..2688)
                     /EC_number="4.3.1.17"
                     /GO_function="GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /GO_process="GO:0006565 - L-serine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /gene="sdaAA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000500050.1"
                     /locus_tag="SPN23F_RS00595"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /old_locus_tag="SPN23F01180"
                     /old_locus_tag="SPN23F_01180"
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="WP_000500038.1"
                     /transl_table=11
                     /translation="MFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMER
                     NLEVMKASVQLGLNENKSRSGLTGGDAAKLDHYIENGKTLSDYTILSAARNAIAVNEHN
                     AKMGLVCATPTAGSAGCLPSVLTAAIEKLDLSHEQQLDFLFAAGAFGLVIANNASISGA
                     EGGCQAEVGSASAMSAAALTLAAGGTPYQASQAIAFVIKNMLGLICDPVAGLVEVPCVK
                     RNAMGASFAFIAADMALAGIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGR
                     RLQKEIFGE"
     misc_feature    2672..2688
                     /note="TFBS match to ZuR_variant_2, Zinc-responsive
                     repressor, confidence: weak, score: 24.79"
                     /tool="antismash"
     gene            complement(2697..3368)
                     /gene="sdaAB"
                     /locus_tag="SPN23F_RS00600"
                     /old_locus_tag="SPN23F01190"
                     /old_locus_tag="SPN23F_01190"
     CDS             complement(2697..3368)
                     /EC_number="4.3.1.17"
                     /GO_function="GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /GO_process="GO:0006565 - L-serine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /gene="sdaAB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015606087.1"
                     /locus_tag="SPN23F_RS00600"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /old_locus_tag="SPN23F01190"
                     /old_locus_tag="SPN23F_01190"
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent
                     subunit beta"
                     /protein_id="WP_000838912.1"
                     /transl_table=11
                     /translation="MKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDDTPTE
                     VEFQLFNSFAKTYRGHGTDLALVAGILGMDTDDPEIPNSLEIAHKRGIKIVWTIQKDSN
                     APHPNTTKITVKNAHKTISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGM
                     IALVTEALSRYGINIAQMNVTREKAGEKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFF
                     K"
     misc_feature    3524..3540
                     /note="TFBS match to HexR, Glucose-responsive regulator,
                     confidence: weak, score: 26.23"
                     /tool="antismash"
     gene            3610..4197
                     /locus_tag="SPN23F_RS00605"
                     /old_locus_tag="SPN23F01200"
                     /old_locus_tag="SPN23F_01200"
     CDS             3610..4197
                     /codon_start=1
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000843467.1"
                     /locus_tag="SPN23F_RS00605"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /old_locus_tag="SPN23F01200"
                     /old_locus_tag="SPN23F_01200"
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="WP_000836442.1"
                     /transl_table=11
                     /translation="MKSITKKIKATLAGVAALFAVFAPSFVSAQESSTYTVKEGDTLSE
                     IAETHNTTVEKLAENNHIDNIHLIYVDQELVIDGPVAPVATPAPATYAAPAAQDETVSA
                     PVAETPVVSETVVSTVSGSEAEAKEWIAQKESGGSYTATNGRYIGRYQLTDSYLNGDYS
                     AENQERVADAYVAGRYGSWTAAKNFWLNNGWY"
     gene            complement(4250..4570)
                     /locus_tag="SPN23F_RS00610"
                     /old_locus_tag="SPN23F01241"
                     /old_locus_tag="SPN23F_01241"
     CDS             complement(4250..4570)
                     /codon_start=1
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001861316.1"
                     /locus_tag="SPN23F_RS00610"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /old_locus_tag="SPN23F01241"
                     /old_locus_tag="SPN23F_01241"
                     /product="hypothetical protein"
                     /protein_id="WP_001861316.1"
                     /transl_table=11
                     /translation="MQRLEVYKNYQHLYDLRMTILLNLSTLYLYNQDKNMCKQICYTLL
                     EDAKNKKSYDRLAICYVRIGICRDDAKLIQKGFSLLELTEETSMLSHLKKEVETHYQPK
                     KL"
     misc_feature    4655..4671
                     /note="TFBS match to HexR, Glucose-responsive regulator,
                     confidence: weak, score: 26.88"
                     /tool="antismash"
     misc_feature    4660..4673
                     /note="TFBS match to MogR, Repressor of flagellar motility
                     genes, confidence: medium, score: 22.93"
                     /tool="antismash"
     misc_feature    complement(4661..4674)
                     /note="TFBS match to MogR, Repressor of flagellar motility
                     genes, confidence: strong, score: 25.42"
                     /tool="antismash"
     misc_feature    complement(4939..4955)
                     /note="TFBS match to HexR, Glucose-responsive regulator,
                     confidence: weak, score: 23.57"
                     /tool="antismash"
     gene            5001..5288
                     /locus_tag="SPN23F_RS00615"
                     /old_locus_tag="SPN23F01202"
                     /old_locus_tag="SPN23F_01202"
     CDS             5001..5288
                     /codon_start=1
                     /gene_functions="biosynthetic (rule-based-clusters)
                     RiPP-like: Lactococcin_972"
                     /gene_kind="biosynthetic"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001230165.1"
                     /locus_tag="SPN23F_RS00615"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /old_locus_tag="SPN23F01202"
                     /old_locus_tag="SPN23F_01202"
                     /product="lactococcin 972 family bacteriocin"
                     /protein_id="WP_001230165.1"
                     /sec_met_domain="Lactococcin_972 (E-value: 1.3e-30,
                     bitscore: 102.8, seeds: 6, tool: rule-based-clusters)"
                     /transl_table=11
                     /translation="MRKLVKIGVASLMVCGILATTNALAVWVEGGQWNYGVGWTGTFGY
                     SDYLHSTRYHTATVRHGGRTSKDYAKPEAWARASLTKIPPTGMEYFYGFE"
     gene            5340..7448
                     /locus_tag="SPN23F_RS00620"
                     /old_locus_tag="SPN23F01210"
                     /old_locus_tag="SPN23F_01210"
     CDS             5340..7448
                     /codon_start=1
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000723955.1"
                     /locus_tag="SPN23F_RS00620"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /old_locus_tag="SPN23F01210"
                     /old_locus_tag="SPN23F_01210"
                     /product="bacteriocin-associated integral membrane family
                     protein"
                     /protein_id="WP_000724257.1"
                     /transl_table=11
                     /translation="MKKISNFCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLY
                     LKDINEPAASVLRFFEDVSKEYKVSIIKTDSGDEVVKSGVFDKDTFPYQEFGISSLDFT
                     TDGEGVYSNKEISNKLGTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEMDKD
                     RIVQKWSDFFKIDQATLLEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEM
                     KRVGVQKLLGFQDRAVLADVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHF
                     LLLQLYLFISWLTYLLIQKMTISSLLKGFSSFKFGLIFNYVMKIGTTILLTALLIGVGR
                     SLEQENKELAYQQQWVSQGNYLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKT
                     QAGYVQSSSLPVKNFVQSEQIQQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMP
                     ASTKGEEDKNQLLGKLIAFHSMKYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENL
                     SNPIISLVNDSDMMWDEKASLSTTGLNNPIKIENTVQHQKEITELVEKLSDGNYLKFSS
                     IQAIQQEKVDSYRDAVRNFNLLFALFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKL
                     VDRYRPLLVLLLLGYSFPLLVLIFFAHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLV
                     ELLKGGIL"
     gene            7445..8086
                     /locus_tag="SPN23F_RS00625"
                     /old_locus_tag="SPN23F01220"
                     /old_locus_tag="SPN23F_01220"
     CDS             7445..8086
                     /codon_start=1
                     /gene_functions="transport (smcogs) SMCOG1000: ABC
                     transporter ATP-binding protein"
                     /gene_kind="transport"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000571330.1"
                     /locus_tag="SPN23F_RS00625"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /old_locus_tag="SPN23F01220"
                     /old_locus_tag="SPN23F_01220"
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="WP_000571330.1"
                     /transl_table=11
                     /translation="MIELKNITKTIGGKVILDNLSLRIDQGDLVAIVGKSGSGKSTLLN
                     LLGLIDGDYSGRYEIFGQTNLAVNSAKSQTIIREHISYLFQNFALIDDETVEYNLMLAL
                     KYVKLPKKDKLKKVEEILERVGLSATLHQRVSELSGGEQQRIAVARAILKPSQLILADE
                     PTGSLDPENRDLVLKFLLEMNREGKTVIIVTHDAYVAQQCHRVIELGEGK"
     misc_feature    complement(8193..8207)
                     /note="TFBS match to SypG, Regulator of biofilm formation
                     and host colonization, confidence: weak, score: 22.38"
                     /tool="antismash"
     gene            8293..9099
                     /locus_tag="SPN23F_RS00630"
                     /old_locus_tag="SPN23F01230"
                     /old_locus_tag="SPN23F_01230"
     CDS             8293..9099
                     /codon_start=1
                     /gene_functions="biosynthetic-additional (smcogs)
                     SMCOG1091: glutamine-binding lipoprotein glnH"
                     /gene_kind="biosynthetic-additional"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001038484.1"
                     /locus_tag="SPN23F_RS00630"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /old_locus_tag="SPN23F01230"
                     /old_locus_tag="SPN23F_01230"
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="WP_001038484.1"
                     /transl_table=11
                     /translation="MNKMKKVLMTMFGLVMLPQLFACSNNQSAGIEAIKSKGKLVVALN
                     PDFAPFEYQKVVDGKNQIVGSDIELAKAIATELGVELELSPMSFDNVLASVQSGKADLA
                     ISGVSKTDERSKVFDFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETM
                     AKDLLQNSSLVSLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQ
                     DDSYAVAMKKDSKELKEAVDKTIQKLKESGELDKLIEDAFKASIEK"
     gene            9116..>9508
                     /locus_tag="SPN23F_RS00635"
                     /old_locus_tag="SPN23F01240"
                     /old_locus_tag="SPN23F_01240"
                     /pseudo=""
     CDS             9116..>9508
                     /GO_function="GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002269502.1"
                     /locus_tag="SPN23F_RS00635"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /old_locus_tag="SPN23F01240"
                     /old_locus_tag="SPN23F_01240"
                     /product="argininosuccinate synthase domain-containing
                     protein"
                     /pseudo=""
                     /transl_table=11
                     /translation="MSKEKVILAYSGGLDTSVAITWLKKDYDVVSVCMDVGEGKDLDFI
                     HDKALKVGAVESYVIDVKDEFATDYVLVAHQSHAYYEQKYPLVSALSRPLISKKLVEIA
                     HQIGATTIAHGCTGKGNDQVEYQIAVA"
     gene            complement(9825..10145)
                     /locus_tag="SPN23F_RS00640"
                     /old_locus_tag="SPN23F01201"
                     /old_locus_tag="SPN23F_01201"
     CDS             complement(9825..10145)
                     /codon_start=1
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001861316.1"
                     /locus_tag="SPN23F_RS00640"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /old_locus_tag="SPN23F01201"
                     /old_locus_tag="SPN23F_01201"
                     /product="hypothetical protein"
                     /protein_id="WP_001861316.1"
                     /transl_table=11
                     /translation="MQRLEVYKNYQHLYDLRMTILLNLSTLYLYNQDKNMCKQICYTLL
                     EDAKNKKSYDRLAICYVRIGICRDDAKLIQKGFSLLELTEETSMLSHLKKEVETHYQPK
                     KL"
     misc_feature    10230..10246
                     /note="TFBS match to HexR, Glucose-responsive regulator,
                     confidence: weak, score: 26.88"
                     /tool="antismash"
     misc_feature    10235..10248
                     /note="TFBS match to MogR, Repressor of flagellar motility
                     genes, confidence: medium, score: 22.93"
                     /tool="antismash"
     misc_feature    complement(10236..10249)
                     /note="TFBS match to MogR, Repressor of flagellar motility
                     genes, confidence: strong, score: 25.42"
                     /tool="antismash"
ORIGIN
        1 gattttagca cacggaaaaa gctgtttagc caagtcatag taaggactaa acatatccat
       61 cgtaatgatt ttcacttgac aacgaacggc tctatcgtag cgaagaaagt gatttcggat
      121 gacagcttgt gttctgcctt caagaacagt gataatatta agattatcaa aatcttgcgc
      181 aatgaaactc atctttccct tagtgaaggc atactcatcc caagacataa tctttggaag
      241 ccgagaaaaa tcatgctcaa agtgaaagtc attgagcttg cgaatgacag ttgaagttga
      301 aatggccagc tgatgggcaa tatcagtcat agaaattttt tcaattaact tttgagcaat
      361 tttttggttg atgatacgag ggatttggtg atttttcttt accaggggag tctcagcaac
      421 catcattttt gaacagtgat agcacttgaa acggcgtttt ctaaggagaa ttctagaagg
      481 cataccagtt gtttcgaggt aagggatctt agacggtttt tgaaagtcat atttcttcat
      541 tagacttcca caatcagggc aagatggagc ctcataatcc agcttagcga taatttcttt
      601 gtgggtatcc atattgatga tatctagaat cttgatgttt gggtctttaa tatcgagcag
      661 ttttgtgata aaatgtaatt gttccatatg attctttcta atgagttgtt ttgtcgcttt
      721 tcattatagg tcatatggga ctttttttct acacaaaaat aagctccata atatccatag
      781 gggatttacc cactacaaat attatagagc ctaaaaaaga aaaacgcata gtatcaagtt
      841 acacaacctt ggtaatatgc gttttattat gtagagactt atactcttcg aaaatctctt
      901 caaaccacgt caacgtcgcc ttgccgtata tggttactga cttcgtcagt tctatccaca
      961 acctcaaaac agtgttttga gctgacttcg tcagttccat ccacaacctt aaaacagtgt
     1021 tttgagctga cttcgtcagt tccatctaca accttaaaac agtgttttga gctgcccgca
     1081 gctagtttcc tagtttgctc tttgattttc attgagtatt acttcatttt cttctgaaat
     1141 ggaattgtta cccagtctat gctattgaaa atacgccaaa acttctaagg gtttgtgagc
     1201 gatataatca ggttgatagt ttagtagatc tgcttgctct ccaaatcccc aagtgatggc
     1261 caatttctga atacctgttt ctcgagctcc cagcatatca aacttggtat ctccgatgat
     1321 gatggcttgt tctggtgcta gttgatgtgt ctgcaaggct tggtgaatga catctgcctt
     1381 atggggtgct tcagggctag aaccataaat gccatcaaag aaatgatgga tttccaagtt
     1441 ttttgccatg tcttgagcag tagatgtatc ctttgtcgtg gtgatgtaga gtggataact
     1501 gctcgataac tcctcaagca agtctataat ctgaggaaag agttgagctt catagatgcc
     1561 ttttgcctta tagtaagaac gatatatctg cacggcttca gaaatttggt ctttggacag
     1621 gcaggtcgca aaactacttt cgagaggtgg tcccataaaa ccacgaatag ttttggcatc
     1681 agggctaggc acccccagct ctttaaaggt ataggtaaag gcattgtgaa tcccgataga
     1741 actatcaacg agggttccat ccaaatcgaa aaaaatcgct gtgatagagg tcatggtttc
     1801 tcctatttga taagcttatt ctccgaaaat ttctttttgg aggcgacgac cagtaggggt
     1861 ggtagcgagt ccaccttcag ctgtttcacg aaaggcagtt ggcatgcttg ctcctacttg
     1921 gtacatggca tcgatcactt catccacagg gattttagat tcgatacctg ccaaggccat
     1981 gtctgctgcg atgaaagcaa agctagctcc catggcatta cgtttgacac agggaacttc
     2041 gaccaaacct gcaacagggt cacagatgag gcctagcata tttttaatga caaaggcaat
     2101 agcttgactg gcctgataag gtgttccacc tgcagccaga gtcaaggcgg cagcactcat
     2161 agcagaggct gaaccaactt cagcttgaca cccaccctca gcacctgaga tggaggcatt
     2221 gtttgcgatg actagtccaa aggcaccagc agcaaagagg aaatccaatt gttgctcgtg
     2281 gctgaggtct aatttttcaa tagcagcagt gagaacggat ggcagacagc cagcacttcc
     2341 agcggttgga gtggcacaga ccaagcccat tttggcattg tgttcattga ctgcgatggc
     2401 atttcgggca gccgagagaa tcgtataatc tgacagagtt tttccgtttt cgatgtagtg
     2461 atccaatttg gcagcatctc cacctgtcag gccactacga gatttatttt cattgaggcc
     2521 aagttggaca gaggctttca taacttccag attgcgttcc atgagaagga agacttcttc
     2581 acgttcgcga ccggtcaatt caaactctgt tgtaatcatg agttctgcga catttccttg
     2641 aaagtccaga tctgcttgct cgaccaattc tttgatagaa taaaacatgc ttcctcctat
     2701 ttaaagaaat tgacattgtg gagatgaggg atttttcgaa tttcttcgat agcctcatca
     2761 cagttgcgac tgtcaacttc gataatcata atggcttttt caccagcttt ttcacgagtg
     2821 acattcatct gggcgatatt gataccatag cgggaaagcg cctctgtaac aagggcaatc
     2881 atacctggaa tatcttgatg aacgatgatg atagtcggtg tattcatatt gagagagacg
     2941 gcaaaaccat tgagttcggt tacctgaata tttcctccac cgatagaaat accagtcacg
     3001 ctgatggtct tgtgggcatt tttaacagta attttagtgg tgttagggtg aggggcattg
     3061 ctgtctttct gaatggtcca gacaatcttg ataccacgct tgtgggcaat ttccagacta
     3121 tttggaattt caggatcatc tgtatccatt cctaaaatac ctgcaacaag ggctaggtct
     3181 gttccgtgac cacgataggt cttggcaaat gagttaaaaa gttggaattc aacttctgtc
     3241 ggagtatcat caaaaatgga agagacaatc ttcccaatac gaacagcacc agcggtatgg
     3301 ctactagatg ggccaatcat aactggtccg atgatatcaa agacagattg aaaacgaagt
     3361 gatttcatca gtttcccctt ataaaaattc ttatctctat tatatcaaag aatgaggggc
     3421 ttggctttaa ttgtggatga aaacctttct aatacctcaa atagcataaa aatagtatct
     3481 tttatgacaa aaaacacctt atttagggaa ataaaaaata attttgtaat atttctacat
     3541 aaaagtgtca agaaacggta atatttaaag ggtatgatag aactatagaa agaaggagaa
     3601 ttttcgaata tgaaatcaat aactaaaaag attaaagcaa ctcttgcagg agtagctgcc
     3661 ttgtttgcag tatttgctcc atcatttgta tctgctcaag aatcatcaac ttacactgtt
     3721 aaagaaggtg atacactttc agaaatcgct gaaactcaca acacaacagt tgaaaaattg
     3781 gcagaaaaca accacattga taacattcat ttgatttatg ttgatcaaga gttggttatc
     3841 gatggccctg tagcgcctgt tgcaacacca gcgccagcta cttatgcggc accagccgct
     3901 caagatgaaa ctgtttcagc tccagtagca gaaactccag tagtaagtga aacagttgtt
     3961 tcaactgtaa gcggatctga agcagaagcc aaagaatgga tcgctcaaaa agaatcaggt
     4021 ggtagctata cagctacaaa tggacgttat atcggacgtt accaattaac agattcatac
     4081 ctgaacggtg actactcagc tgaaaaccaa gaacgtgtag cagatgccta cgttgcagga
     4141 cgttacggtt catggactgc tgctaaaaac ttctggctta acaatggctg gtattaagaa
     4201 ctaacgaaca aataatatgt aaagagtcga ggaaatccct cgactttttt tataatttct
     4261 ttggttgata atgggtctct acttcttttt tgagatgaga cagcatagaa gtttcctcgg
     4321 tcagctctag gagtgagaac cctttttgga taagtttcgc atcatcccta caaatcccaa
     4381 tacggacata gcagatagcc agcctatcgt agcttttctt attcttggcg tcctccagta
     4441 aagtgtagca gatttgctta cacatgtttt tatcttgatt gtatagatag agtgtggaaa
     4501 ggtttaatag aattgtcatt cgcaagtcat ataaatgttg atagttttta tagacttcta
     4561 agcgttgcaa gattttctcg gattattgac aaataaacgg acattctgat agacgattgc
     4621 cctagcggct tagtgtaaac tttacaaatt tggcttgtaa tttttttata aaattcactt
     4681 cagttacttg acagttatta tattttcgct tatgcttatt atatagataa aaggacggga
     4741 taggagttta aaaatttgaa agcgctatcc atattgttta ttggactgat tcttgagtaa
     4801 tagttagagt ttgcttaata ctactctggt tgttcaagga cctgatacag aagcgcacca
     4861 ttctcccggt taagagtaag ttcgttgtta aaaaatgaaa tgagatagaa ggaaggtgag
     4921 tccaatggac tacgatactt gttgataaat tactatagct gtttttacgg aacagctctc
     4981 gataatagga gaaataaatc atgagaaaat tagttaaaat tggtgttgca tctttaatgg
     5041 tatgtggtat acttgctact acaaatgctt tagcagtatg ggttgagggt ggtcaatgga
     5101 actatggagt aggttggaca ggaacttttg gatattctga ttacttacat tctactcgat
     5161 atcatacagc aactgttaga catgggggta gaacctctaa ggattatgca aaacctgagg
     5221 catgggctag agcttccctc accaagattc cgccaacagg aatggaatat ttctatggat
     5281 ttgagtaaaa ttcttccctc tcctatttgg agagggaaaa ctgtagtgga ggcactttta
     5341 tgaaaaaaat cagtaatttc tgtatgttac tcctgcttct gtgtaccact ttttttgttt
     5401 ttaatgtaaa ctatacacga gaagtggttc ggattcaaga aatgggaaag actgtagatt
     5461 ctttggattt gtatttgaaa gatattaacg aacctgcagc gtctgttctt cgattttttg
     5521 aggatgtatc aaaggagtat aaagtctcca tcatcaaaac agacagtggt gatgaggtgg
     5581 tcaagtctgg tgtttttgat aaagatacct tcccctacca agagtttggg atttcttctc
     5641 ttgattttac cacagatggt gaaggagtct atagtaataa agaaatttcc aataaacttg
     5701 gtacgattcc gacctttcta aaagccaaac ctattcagct tatgactttt caaacctata
     5761 tcaaggatac atctcgtagt ttaaatggtc gctatacgat aacttctaca caagagatgg
     5821 acaaggatag gattgtacag aaatggagcg attttttcaa gatagaccag gctaccttgc
     5881 tagagccgac ctacaaaagt gcagtggaag tcataaatcg agatttgctt ttatctgcca
     5941 ttgtttttgt cttggctatt ttgcttcttg tgttagtgac agtgtatcaa ccgatgatgg
     6001 agatgaaaag agttggggta caaaaattac ttggttttca agatagggct gttttagctg
     6061 atgttgtaaa aggcaacctt tacctcctcc taggtggggc tcttgtgatc aatctaggcg
     6121 tgtttttctt gcttgattat aagccaaaag atttgtttcc tatgctgtgg ttgtctcatt
     6181 ttttgctgtt gcagctttat ctctttatca gttggttgac ttacctctta atccaaaaaa
     6241 tgacaatcag ctctctgctg aaaggttttt catctttcaa atttggtctt atcttcaatt
     6301 atgtgatgaa aatagggaca actattttac tgacggcctt actgattggg gtgggcagaa
     6361 gtttagaaca agaaaacaaa gaacttgctt atcagcaaca gtgggtaagt caaggtaatt
     6421 acctgacctt agaaaccttc aaactcaatg ataatctgtg gcaagaagag ctagcagggt
     6481 cagggaaatc tacagattat ttctatcgat tttatcagga tttggtagaa aaaacgcagg
     6541 cgggctatgt gcagagtagc agtcttcctg taaaaaattt tgtccaatca gaacagattc
     6601 agcaatatca gttaacagat acggtggatg tttactatgc caatcgcaat tttctaaaga
     6661 gcaagggatt caagctacca gataccggta ttaaaaaagt tattttgatg ccagcaagta
     6721 cgaaaggtga agaagataaa aatcagctct tggggaagtt aattgccttt cattcgatga
     6781 agtatgaaga gcagcaaaaa cgaacgatag aggagatgga tgtcgagatt gcctattatg
     6841 aaggagattg gtcatttttc ccatatagtg ataagcgaaa ggaaaatctc tccaatccaa
     6901 ttattagctt ggtcaatgat tctgatatga tgtgggatga gaaagcctcc ctgtcaacaa
     6961 ctggcttaaa taatccgatt aaaattgaaa atacggttca acatcaaaaa gagattacag
     7021 agctagttga gaaattgtca gatggaaatt atttaaaatt ttcatctatt caagccattc
     7081 aacaagagaa agtggattct tatcgagatg ctgttcggaa ttttaaccta ctctttgctt
     7141 tgtttggtct ccttagcatg atgatttcct acttcttact agtaacaact ttcttattga
     7201 agcgcaggga tatcattacc aagaagttta tggggtggaa actggtcgat cgctaccgtc
     7261 ctctcctcgt tctgctcttg ctgggctata gtttccctct tctagtcttg attttctttg
     7321 cccatgcgtt cttaccactt ctactgtttg caggttttac atgtctggat atactatttg
     7381 tgctaggctt agcttctagg atggagaaaa gaagtctagt agagttattg aaagggggca
     7441 tcttatgatt gagttgaaaa atattaccaa aaccattggg ggaaaagtga ttttggataa
     7501 cttatctctc aggattgatc agggggattt ggtagctatt gttggtaaga gtggtagtgg
     7561 gaagtcgacc ttgttaaatt tattgggttt gatagatggt gattatagcg gacggtatga
     7621 gatttttggt cagacaaatc tagcggttaa ttctgctaag tcgcaaacaa taatccgtga
     7681 acatatctct tatctgtttc aaaattttgc cctgattgat gatgaaacgg tcgagtacaa
     7741 tctcatgctg gcgctgaaat atgtgaaatt gcctaagaaa gacaagctca aaaaggtgga
     7801 agagatttta gagagagtag gtttgtcagc tactttgcat caaagggtct ccgagttgtc
     7861 tgggggcgaa caacaacgaa ttgcagttgc tagagccatc ttaaaaccca gccagctgat
     7921 tttagccgat gaacctacag gttcgctgga tcctgaaaat agagatttgg tcttgaagtt
     7981 tctcttagag atgaatcgag aagggaaaac agtcattatt gtgacccacg atgcttatgt
     8041 agcccaacaa tgtcatcgtg tcattgaatt gggcgaggga aaatgagttc attcagctcc
     8101 ttttgactgg ctgaatactc atgttttcca gagaaaaata gcataaatac gcctaggaat
     8161 gacattttat gtagtatttc taggtttttt ttgtttcaaa ttgaaaattt tttcaattta
     8221 ggcttgacaa aggatgagta taggagtatt atttatacaa taaaaaagaa taaacataaa
     8281 ggaggctttg ttatgaataa gatgaagaag gtgttgatga cgatgtttgg tttagtgatg
     8341 ctcccccaac tatttgcttg tagtaacaat caatcggctg gaattgaagc catcaagtcc
     8401 aaaggaaaat tggttgtagc cctcaatcca gattttgctc catttgaata tcaaaaagtg
     8461 gttgatggga aaaatcagat tgtgggttca gatatcgaat tagccaaggc tatcgcaaca
     8521 gaactaggtg tcgaattgga actatctcct atgagttttg acaatgtact ggctagcgtt
     8581 caatcaggaa aagctgacct tgccatatca ggtgtttcta agacagatga acggagcaag
     8641 gtgtttgatt tttcaactcc ctactatact gcaaaaaata aactcattgt caaaaaatct
     8701 gatttagcca cttatcagtc tgtcaacgat ttggcgcaga aaaaggtcgg agcgcagaaa
     8761 ggttcgattc aagagacgat ggcgaaagat ttgctacaaa attcttccct cgtatctctg
     8821 cctaaaaatg ggaatttaat cacagattta aaatcagggc aagtggatgc cgttattttt
     8881 gaagaacccg ttgccaaggg atttgtggaa aataatcctg atttagcaat cgcagacctc
     8941 aattttgaaa aagagcaaga tgattcctat gcggtagcca tgaaaaaaga tagcaaggaa
     9001 ttgaaagagg cagtcgataa aaccattcaa aagttgaagg agtctgggga attagacaaa
     9061 ctcattgagg atgcctttaa agcatccatt gaaaaataga aagaaggaaa agaacatgag
     9121 taaagaaaaa gtaattttgg cctattctgg cggtttggac acatcagttg ctattacctg
     9181 gttaaagaaa gactatgatg ttgtttcagt ttgtatggat gtgggtgaag ggaaagactt
     9241 agatttcatc catgataagg ctcttaaggt tggggcagta gaatcttatg tcattgatgt
     9301 taaggacgaa tttgctacag attatgtgct agtggctcat cagtcacatg cctattatga
     9361 acaaaagtat cccttggtat ctgccttgag ccgccctctg atttctaaaa aattggttga
     9421 aatagcgcat cagataggag cgactacaat tgctcatggt tgtaccggta aggggaatga
     9481 ccaagtcgaa taccagattg cagtcgctaa gaaagcgaat gaagctaaaa agtgatggag
     9541 tgatgggttc agaataagag gttggtcgat tggcagcctc tttcttgtcg ttgaaaaagt
     9601 gagatatatt gacttttgaa aaaaatgtca taattgagtt gggataaacg taaaagtcat
     9661 actttctcgt taaatcgttc ggcgattcat ggtgacatgg acacatagta gtaaacacac
     9721 tatgtggctt ggcagagcta aaaacttctg gtttaacaat ggctggtatt aagaactaac
     9781 gaacaaataa tatgtaaaga gtcgaggaaa tccctcgact ttttttataa tttctttggt
     9841 tgataatggg tctctacttc ttttttgaga tgagacagca tagaagtttc ctcggtcagc
     9901 tctaggagtg agaacccttt ttggataagt ttcgcatcat ccctacaaat cccaatacgg
     9961 acatagcaga tagccagcct atcgtagctt ttcttattct tggcgtcctc cagtaaagtg
    10021 tagcagattt gcttacacat gtttttatct tgattgtata gatagagtgt ggaaaggttt
    10081 aatagaattg tcattcgcaa gtcatataaa tgttgatagt ttttatagac ttctaagcgt
    10141 tgcaagattt tctcggatta ttgacaaata aacggacatt ctgatagacg attgccctag
    10201 cggcttagtg taaactttac aaatttggct tgtaattttt ttataaaatt cacttcagtt
    10261 acttgacagt tattatattt tcgcttat
//
